Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   PF986_RS10440 Genome accession   NZ_CP116013
Coordinates   2164338..2166647 (-) Length   769 a.a.
NCBI ID   WP_260654593.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM124349     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2159338..2171647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF986_RS10400 (PF986_10400) - 2159798..2160229 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  PF986_RS10405 (PF986_10405) - 2160229..2160570 (+) 342 WP_022553706.1 Na(+)/H(+) antiporter subunit C -
  PF986_RS10410 (PF986_10410) - 2160563..2162044 (+) 1482 WP_128974217.1 Na+/H+ antiporter subunit D -
  PF986_RS10415 (PF986_10415) - 2162050..2162526 (+) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  PF986_RS10420 (PF986_10420) - 2162526..2162810 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  PF986_RS10425 (PF986_10425) mnhG 2162794..2163168 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  PF986_RS10430 (PF986_10430) - 2163208..2163591 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  PF986_RS10435 (PF986_10435) comA 2163613..2164257 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  PF986_RS10440 (PF986_10440) comP 2164338..2166647 (-) 2310 WP_260654593.1 histidine kinase Regulator
  PF986_RS10445 (PF986_10445) - 2166667..2166843 (-) 177 WP_087634937.1 competence pheromone ComX -
  PF986_RS10450 (PF986_10450) comQ 2166843..2167781 (-) 939 WP_271243340.1 polyprenyl synthetase family protein Regulator
  PF986_RS10455 (PF986_10455) degQ 2167912..2168052 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  PF986_RS10460 (PF986_10460) - 2168517..2168858 (+) 342 WP_014418765.1 hypothetical protein -
  PF986_RS10465 (PF986_10465) - 2168865..2170088 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 769 a.a.        Molecular weight: 89220.59 Da        Isoelectric Point: 8.5862

>NTDB_id=775198 PF986_RS10440 WP_260654593.1 2164338..2166647(-) (comP) [Bacillus velezensis strain SRCM124349]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETSYGKFVGLEKGDIILKINNEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIIMEFFRKKLPFDNIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVVPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTDELQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQFIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILFHDKKDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGCNQEKGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=775198 PF986_RS10440 WP_260654593.1 2164338..2166647(-) (comP) [Bacillus velezensis strain SRCM124349]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTTATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCTTATATAAA
CATAAATGGGATTATAATCGGAACAAAAGTTATTGAAAACAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTT
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGCGACATCATTCTAAAAATCAACAATGAAAAACCATCTGCTAAATTTTTA
AAAGGGGATAATCTTAGTCATATCAAAAGTTTAGATGTGAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTCAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTCTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGATATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTCCCGATTTTTAATATTATCATGGAGTTTTTTCGTAAGAAATTACCTTTTGACAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAATATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGTACCTAATA
TTTTAACTGGTGATTATATCTTTCCAGCACTGGCATCAGCCTCATTGCTTGTTCTTATTCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGATATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAGATGAGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGTTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACCCAGTTTATCAGAAGTATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATTTC
ATGATAAAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTAT
TAATACACCGAGACTGACACGAGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGATCTAAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTAATTTCTTT
GAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGCTGCAATCAGGAAAAAGGCGGCGGCCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(569-638)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.616

100

0.758