Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PF977_RS20535 Genome accession   NZ_CP116012
Coordinates   3874691..3875641 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain SRCM124333     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3869691..3880641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS20515 (PF977_20515) cdaE 3870559..3871977 (+) 1419 WP_015715248.1 MDR family MFS transporter -
  PF977_RS20520 (PF977_20520) yclQ 3872024..3872977 (-) 954 WP_015715247.1 petrobactin ABC transporter substrate-binding protein YclQ -
  PF977_RS20525 (PF977_20525) yclP 3872999..3873757 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  PF977_RS20530 (PF977_20530) yclO 3873751..3874698 (-) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  PF977_RS20535 (PF977_20535) ceuB 3874691..3875641 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  PF977_RS20540 (PF977_20540) thrD 3876026..3877390 (+) 1365 WP_015715246.1 aspartate kinase -
  PF977_RS20545 (PF977_20545) yczN 3877543..3877656 (+) 114 WP_014478831.1 YjcZ family sporulation protein -
  PF977_RS20550 (PF977_20550) yczM 3877738..3877827 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  PF977_RS20555 (PF977_20555) phrC 3877927..3878049 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  PF977_RS20560 (PF977_20560) rapC 3878033..3879181 (-) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=775140 PF977_RS20535 WP_014475804.1 3874691..3875641(-) (ceuB) [Bacillus subtilis strain SRCM124333]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=775140 PF977_RS20535 WP_014475804.1 3874691..3875641(-) (ceuB) [Bacillus subtilis strain SRCM124333]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGATACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTGATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525