Detailed information NTG0773414

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: O6P39_RS09060
• Genome accession: NZ_CP115669
• Coordinates: 1929313..1931523 (+)
• Length: 736 a.a.
• NCBI ID: WP_275611020.1
• Uniprot ID: -
• Organism: Pseudomonas sp. PSE14
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1924313..1936523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O6P39_RS09035 (O6P39_09035)	-	1924571..1925146 (-)	576	WP_275611015.1	PilZ domain-containing protein	-
O6P39_RS09040 (O6P39_09040)	-	1925271..1926524 (+)	1254	WP_275611016.1	lipoprotein-releasing ABC transporter permease subunit	-
O6P39_RS09045 (O6P39_09045)	lolD	1926517..1927215 (+)	699	WP_275611017.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
O6P39_RS09050 (O6P39_09050)	-	1927227..1928474 (+)	1248	WP_275611018.1	lipoprotein-releasing ABC transporter permease subunit	-
O6P39_RS09055 (O6P39_09055)	-	1928618..1929148 (-)	531	WP_275611019.1	DUF2062 domain-containing protein	-
O6P39_RS09060 (O6P39_09060)	comA	1929313..1931523 (+)	2211	WP_275611020.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
O6P39_RS09065 (O6P39_09065)	exbB	1931595..1932230 (+)	636	WP_275611021.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
O6P39_RS09070 (O6P39_09070)	-	1932227..1932676 (+)	450	WP_275611022.1	biopolymer transporter ExbD	-
O6P39_RS09075 (O6P39_09075)	lpxK	1932676..1933674 (+)	999	WP_275611023.1	tetraacyldisaccharide 4'-kinase	-
O6P39_RS09080 (O6P39_09080)	-	1933729..1933914 (+)	186	WP_009621404.1	Trm112 family protein	-
O6P39_RS09085 (O6P39_09085)	kdsB	1933919..1934683 (+)	765	WP_275611024.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
O6P39_RS09090 (O6P39_09090)	-	1934683..1935147 (+)	465	WP_275611025.1	low molecular weight protein-tyrosine-phosphatase	-
O6P39_RS09095 (O6P39_09095)	murB	1935144..1936163 (+)	1020	WP_275611026.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79169.88 Da
• Isoelectric Point: 8.9550

>NTDB_id=773414 O6P39_RS09060 WP_275611020.1 1929313..1931523(+) (comA) [Pseudomonas sp. PSE14]
MFALALGLLALRGLPVLPPAWALLLLAALGLPLLFTRGYLIGLFLLGFAWACQSAQWALDDRLAVALDGRTLWLEGRVEG
LPDRSGPSVRFMLADVSSPRAQVPGTLRLSWFGGPPVEGGERWRLAVKLKRPHGMANGAGFDYEAWLTAQRIGATGSVKD
GQRLESASGPPAWREAWRQRLLAVDAHGRSGALAALVLGDASGLTMADWQVLQDTGTLHLMVISGSHISLLAGLLYALVA
GLARFGIWPPRLPWLPCACLLAALGAWAYSLMAGFEVPLQRACIMVSIVLLWRLRYRHGGLWTPLLGALLAVLLAEPLVV
LLPGFWLSYAAVALLIFGFSGRLGRWTAWRTWLRAQWLMAIGLLPASIALGLPLSVSGVVANLIAVPWVEMLVVPLALLG
SLALGIPWLGEALLWVSGGLLELLFQLLGWMAALAPAWQPVAAPAWALLLAMLGALVLLAPSGVPLRALGLVMFLPVFWP
SIALPPPGVAEVRVLDVGQGLSVMIRTRSRAWLYDTGARNGDFDIGERVVVPTLRSLGIGHLDLLMLSHADNDHAGGALA
VKKSLRPAQVISGEPDRLSPELGAQPCRKQRWVIDGVNFESWAWDVARESNDRSCVLQIEADGERLLLTGDLPQSGELAW
LAAHPDVRVDWLLAGHHGSRSSSGPAFVRAVSPSAAIISRGANNPYGHPHPSVVERFRALGIRIHDTAQEGALTLMLGAH
GELRGVREGAHFWQEK

Nucleotide

• Length: 2211 bp

>NTDB_id=773414 O6P39_RS09060 WP_275611020.1 1929313..1931523(+) (comA) [Pseudomonas sp. PSE14]
ATGTTCGCGCTGGCCCTCGGATTGCTGGCGCTGCGCGGGTTGCCGGTGCTTCCGCCCGCTTGGGCGCTGTTGCTCCTGGC
GGCACTGGGGTTGCCCTTGCTGTTCACCCGCGGCTATCTCATCGGCCTGTTCCTGCTGGGGTTCGCCTGGGCCTGCCAGT
CGGCCCAATGGGCGCTGGATGACCGGCTGGCCGTGGCGCTCGACGGCCGCACGCTGTGGCTGGAGGGCAGGGTAGAGGGG
CTGCCGGATCGCTCCGGGCCCTCGGTGCGCTTCATGCTTGCCGATGTCTCCAGCCCTCGTGCGCAGGTGCCAGGGACGCT
GCGCCTGTCCTGGTTCGGCGGCCCGCCGGTGGAAGGCGGCGAGCGCTGGCGCCTGGCGGTGAAGCTCAAGCGCCCGCACG
GCATGGCCAACGGCGCTGGCTTCGACTACGAGGCCTGGCTCACTGCGCAGCGGATCGGCGCCACCGGCAGCGTGAAGGAC
GGGCAGCGACTGGAGTCGGCCAGCGGCCCGCCGGCCTGGCGGGAGGCCTGGCGACAACGCTTGCTGGCGGTGGACGCCCA
TGGCCGATCCGGTGCCCTGGCGGCGCTGGTGCTGGGGGATGCGTCCGGCCTGACCATGGCGGACTGGCAGGTGTTGCAGG
ACACCGGAACCCTGCACCTGATGGTGATTTCCGGCTCGCACATTTCCCTGCTGGCCGGTCTGCTCTATGCGCTGGTCGCC
GGGCTGGCGCGTTTCGGCATCTGGCCCCCACGCTTACCCTGGCTCCCCTGCGCCTGCCTGCTGGCGGCACTCGGGGCCTG
GGCCTACAGCTTGATGGCGGGGTTCGAGGTACCGCTGCAGCGCGCCTGCATCATGGTCTCGATCGTCCTGCTGTGGCGTC
TGCGTTACCGCCATGGCGGCTTGTGGACGCCGCTGCTGGGTGCCTTGCTGGCGGTGCTGCTGGCCGAGCCGCTGGTGGTG
CTGTTGCCCGGCTTCTGGCTGTCCTATGCGGCGGTGGCGCTGCTGATCTTCGGTTTTTCCGGTCGACTGGGGCGCTGGAC
GGCCTGGAGAACCTGGCTGCGGGCACAGTGGCTGATGGCGATCGGGTTGCTGCCTGCGTCCATTGCGCTCGGCCTGCCGC
TGAGTGTTTCCGGGGTGGTCGCCAACCTGATCGCAGTGCCCTGGGTGGAAATGCTGGTGGTGCCCCTGGCTCTGCTGGGC
AGCCTGGCGTTGGGTATTCCCTGGCTGGGCGAGGCTTTGCTCTGGGTGTCAGGCGGGTTGCTGGAGCTGTTGTTCCAGCT
GCTGGGCTGGATGGCCGCCTTGGCGCCTGCCTGGCAGCCGGTCGCCGCTCCGGCCTGGGCGCTGCTGTTGGCGATGCTGG
GCGCGCTGGTACTGCTGGCGCCGTCCGGAGTGCCGCTGCGCGCGCTCGGGTTGGTGATGTTCCTGCCGGTGTTCTGGCCG
TCCATTGCTCTGCCGCCGCCCGGGGTGGCCGAGGTTCGGGTACTGGATGTGGGGCAGGGGCTTTCCGTGATGATCCGTAC
CCGCAGTCGGGCCTGGCTCTACGACACCGGTGCGCGCAATGGCGACTTCGATATCGGCGAGCGCGTCGTCGTACCGACGC
TGCGGAGCCTGGGAATCGGTCATCTCGACCTGCTGATGCTCAGCCATGCCGATAACGACCACGCCGGTGGCGCCCTGGCG
GTGAAGAAGTCGCTGCGGCCGGCGCAGGTGATCAGCGGCGAGCCGGATCGCCTGTCTCCCGAGTTAGGGGCCCAGCCTTG
CCGGAAGCAGCGCTGGGTCATCGATGGGGTGAACTTCGAGAGCTGGGCCTGGGATGTTGCCCGGGAAAGCAATGATCGCT
CCTGCGTTCTCCAGATCGAAGCCGACGGCGAACGCCTGCTGCTGACCGGCGACCTGCCGCAATCCGGTGAACTGGCCTGG
CTGGCCGCGCACCCGGATGTCCGAGTCGACTGGCTGCTGGCCGGTCACCACGGTAGCCGCAGTTCGTCCGGGCCAGCTTT
CGTACGGGCGGTGTCGCCATCCGCCGCGATTATTTCCCGCGGCGCCAACAACCCCTACGGCCATCCCCATCCGTCGGTCG
TCGAGCGCTTCCGTGCACTCGGCATCCGGATTCACGATACGGCCCAGGAAGGCGCGTTGACGCTGATGCTCGGTGCCCAT
GGCGAGCTCCGGGGAGTGCGGGAAGGTGCACATTTCTGGCAGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (19-163)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-678)

• Competence protein (Competence) (196-459)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.441	97.147	0.577
comA	Ralstonia pseudosolanacearum GMI1000	34.777	100	0.382