Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | H7R41_RS01615 | Genome accession | NZ_AP022238 |
| Coordinates | 351175..351600 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain WP8-W18-ESBL-11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 346175..356600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R41_RS01605 (WP8W18E11_03070) | pilY1 | 346829..350683 (+) | 3855 | WP_002062153.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| H7R41_RS01610 (WP8W18E11_03080) | pilY2 | 350696..351178 (+) | 483 | WP_025468267.1 | type IV pilin protein | Machinery gene |
| H7R41_RS01615 (WP8W18E11_03090) | pilE | 351175..351600 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| H7R41_RS01620 (WP8W18E11_03100) | rpsP | 351747..351998 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| H7R41_RS01625 (WP8W18E11_03110) | rimM | 352018..352566 (+) | 549 | WP_002062174.1 | ribosome maturation factor RimM | - |
| H7R41_RS01630 (WP8W18E11_03120) | trmD | 352612..353352 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| H7R41_RS01635 (WP8W18E11_03130) | rplS | 353560..353928 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| H7R41_RS01640 (WP8W18E11_03140) | - | 353981..354922 (-) | 942 | WP_100228732.1 | triacylglycerol lipase | - |
| H7R41_RS01645 (WP8W18E11_03150) | - | 355037..356071 (-) | 1035 | WP_002062194.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=77297 H7R41_RS01615 WP_000788342.1 351175..351600(+) (pilE) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=77297 H7R41_RS01615 WP_000788342.1 351175..351600(+) (pilE) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |