Detailed information NTG0077153

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BSG8_RS13525
• Genome accession: NZ_AP025224
• Coordinates: 2478689..2479294 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. natto strain G8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2473689..2484294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSG8_RS13495 (BSG8_26730)	-	2474502..2474891 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
BSG8_RS13500 (BSG8_26740)	yajC	2474948..2475214 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
BSG8_RS13505 (BSG8_26750)	tgt	2475251..2476396 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
BSG8_RS13510 (BSG8_26760)	queA	2476423..2477451 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BSG8_RS13515 (BSG8_26770)	yrzS	2477481..2477681 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
BSG8_RS13520 (BSG8_26780)	ruvB	2477674..2478678 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BSG8_RS13525 (BSG8_26790)	ruvA	2478689..2479294 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
BSG8_RS13530 (BSG8_26800)	bofC	2479433..2479945 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
BSG8_RS13535 (BSG8_26810)	csbX	2479993..2481300 (-)	1308	WP_014480439.1	MFS transporter	-
BSG8_RS13540 (BSG8_26820)	iolG	2481371..2482396 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
BSG8_RS13545 (BSG8_26830)	yrzF	2482634..2483281 (+)	648	WP_014480441.1	phosphotransferase	-
BSG8_RS13550 (BSG8_26840)	-	2483327..2483449 (-)	123	WP_003229707.1	hypothetical protein	-
BSG8_RS13555	-	2483534..2483608 (+)	75	Protein_2668	hypothetical protein	-
BSG8_RS13560 (BSG8_26850)	-	2483612..2483980 (+)	369	WP_186437837.1	DUF5412 family protein	-
BSG8_RS13565	-	2483987..2484127 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=77153 BSG8_RS13525 WP_003229717.1 2478689..2479294(-) (ruvA) [Bacillus subtilis subsp. natto strain G8]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=77153 BSG8_RS13525 WP_003229717.1 2478689..2479294(-) (ruvA) [Bacillus subtilis subsp. natto strain G8]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408