Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   QQ984_RS07240 Genome accession   NZ_CP127223
Coordinates   1418231..1419532 (-) Length   433 a.a.
NCBI ID   WP_177232278.1    Uniprot ID   -
Organism   Bacillus licheniformis strain Jrh14-10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1413231..1424532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QQ984_RS07220 (QQ984_07220) - 1413779..1414663 (+) 885 WP_003180929.1 carbohydrate ABC transporter permease -
  QQ984_RS07225 (QQ984_07225) - 1414701..1416029 (-) 1329 WP_009328706.1 amino acid permease -
  QQ984_RS07230 (QQ984_07230) - 1416349..1417302 (+) 954 WP_011197826.1 ring-cleaving dioxygenase -
  QQ984_RS07235 (QQ984_07235) - 1417695..1418057 (+) 363 WP_003180937.1 hypothetical protein -
  QQ984_RS07240 (QQ984_07240) htrA 1418231..1419532 (-) 1302 WP_177232278.1 trypsin-like peptidase domain-containing protein Regulator
  QQ984_RS07245 (QQ984_07245) proG 1419688..1420500 (+) 813 WP_011197828.1 pyrroline-5-carboxylate reductase ProG -
  QQ984_RS07250 (QQ984_07250) - 1420716..1421540 (+) 825 WP_009328702.1 M55 family metallopeptidase -
  QQ984_RS07255 (QQ984_07255) - 1421556..1422482 (+) 927 WP_009328701.1 ABC transporter permease -
  QQ984_RS07260 (QQ984_07260) - 1422487..1423446 (+) 960 WP_009328700.1 ABC transporter permease -
  QQ984_RS07265 (QQ984_07265) - 1423454..1424452 (+) 999 WP_061565954.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 433 a.a.        Molecular weight: 45735.97 Da        Isoelectric Point: 4.7712

>NTDB_id=771447 QQ984_RS07240 WP_177232278.1 1418231..1419532(-) (htrA) [Bacillus licheniformis strain Jrh14-10]
MMEYNREDQLETKNELIVSDQKPDQAIKKAEQQKRRLSWMTPILSGIIGGSLVLGVTTYQHSKDETANTSVQTQTNETSN
SSASSTKANTEKLSSTNSSDISTMVENVSPAIVGISNYQKQTESGMFGFESNSSSSSEQETGTGSGVIYKKANGRAYIIT
NNHVVEGASKLTVSLSNGKEVEGKLLGSDSLTDLAVVEISADHVEKVASFGDSSSLKAGESVIAIGNPLGKDLSRTVTQG
IISGVDRTVSVDTSAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPIAEELMSK
GKIERPFIGIGMMDLEQVPENYQTGTLGLSGSQLNKGVYIRQVASGSPAEKAGLKENDVIVSFNGKETDTGSALRNLLYN
DAKIGDTVKVTLIRNGKTMTKQITLDQKESASS

Nucleotide


Download         Length: 1302 bp        

>NTDB_id=771447 QQ984_RS07240 WP_177232278.1 1418231..1419532(-) (htrA) [Bacillus licheniformis strain Jrh14-10]
ATGATGGAATATAATAGAGAAGATCAGCTTGAAACAAAAAACGAACTCATCGTCTCCGATCAAAAGCCCGACCAGGCGAT
AAAAAAAGCAGAACAGCAAAAGCGGAGACTCTCGTGGATGACGCCGATTCTCAGCGGCATCATCGGAGGAAGCCTCGTTC
TCGGCGTCACGACATACCAGCATAGCAAAGACGAAACGGCCAATACATCCGTCCAGACGCAAACAAACGAGACGTCGAAC
TCATCGGCTTCTTCCACTAAAGCGAATACCGAAAAATTGTCCAGCACCAATTCGTCCGACATTTCTACAATGGTTGAAAA
TGTATCTCCCGCCATCGTCGGTATTTCAAACTATCAAAAACAAACAGAGAGCGGTATGTTCGGTTTTGAAAGCAACAGCA
GCAGCTCAAGCGAACAAGAAACAGGCACAGGCTCAGGTGTCATCTATAAAAAAGCAAACGGCAGAGCATACATTATTACA
AATAACCACGTTGTCGAAGGCGCGTCTAAACTGACGGTTTCCCTGTCCAACGGCAAAGAAGTGGAAGGTAAATTGCTGGG
CAGCGATTCGTTGACAGACCTTGCCGTTGTTGAAATTTCCGCTGATCACGTGGAAAAAGTCGCCTCTTTCGGCGATTCGT
CAAGCTTGAAAGCAGGCGAATCGGTGATCGCTATTGGAAACCCGCTCGGCAAAGATCTGTCCCGCACGGTGACACAAGGC
ATCATCAGCGGTGTTGATCGGACCGTTTCCGTAGATACATCCGCAGGCCAAACCGAGATGAACGTCATTCAAACCGACGC
GGCCATCAACCCCGGCAACAGCGGAGGCGCCCTTTTGAATACAAAGGGTGAAGTGATCGGCATCAACAGCATGAAAATCA
GTGAAAGCGGAGTAGAAGGCATCGGATTTGCGATTCCAAGCAATGATGTCAAACCGATTGCAGAAGAGCTGATGTCTAAA
GGAAAAATTGAGCGCCCGTTCATCGGAATCGGCATGATGGATCTTGAGCAGGTGCCGGAAAACTATCAAACAGGCACCCT
CGGATTAAGCGGCAGCCAGTTAAACAAAGGCGTCTACATCCGCCAGGTCGCTTCAGGCTCCCCAGCTGAAAAAGCGGGCC
TTAAAGAGAACGATGTCATCGTCAGCTTTAACGGAAAAGAAACCGATACAGGAAGCGCGCTGCGCAACCTTCTTTACAAC
GATGCAAAAATCGGGGATACGGTAAAGGTTACCCTCATTCGAAACGGCAAAACCATGACAAAACAAATCACCCTTGACCA
GAAAGAATCCGCATCATCTTAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(328-425)

Peptidase family M50 (Peptidase_M50)

(69-430)

Trypsin-like peptidase domain (Trypsin_2)

(144-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

42.04

92.841

0.39
  htrA Streptococcus gordonii str. Challis substr. CH1

38.971

94.226

0.367
  htrA Streptococcus mitis NCTC 12261

43.733

82.91

0.363