Detailed information NTG0771327

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QPK52_RS18230
• Genome accession: NZ_CP127170
• Coordinates: 4049293..4050588 (+)
• Length: 431 a.a.
• NCBI ID: WP_093654456.1
• Uniprot ID: A0A1H8Z2G1
• Organism: Streptomyces sp. KL2
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4044293..4055588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPK52_RS18200	-	4045457..4045651 (+)	195	WP_093654442.1	hypothetical protein	-
QPK52_RS18215	tig	4046116..4047504 (+)	1389	WP_410538544.1	trigger factor	-
QPK52_RS18220	clpP	4047759..4048361 (+)	603	WP_177213868.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QPK52_RS18225	clpP	4048426..4049112 (+)	687	WP_410538545.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QPK52_RS18230	clpX	4049293..4050588 (+)	1296	WP_093654456.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QPK52_RS18235	-	4050677..4051630 (-)	954	WP_410538546.1	hypothetical protein	-
QPK52_RS18240	-	4051763..4054411 (+)	2649	WP_410538547.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 431 a.a.
• Molecular weight: 47142.93 Da
• Isoelectric Point: 4.8306

>NTDB_id=771327 QPK52_RS18230 WP_093654456.1 4049293..4050588(+) (clpX) [Streptomyces sp. KL2]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELADTSEMRWDELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGSQGRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASNQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
EDVVHSNVNPTLVPRSRGEREQGQGPREKSA

Nucleotide

• Length: 1296 bp

>NTDB_id=771327 QPK52_RS18230 WP_093654456.1 4049293..4050588(+) (clpX) [Streptomyces sp. KL2]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGGCCGGGCGTCTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCCGACACCT
CCGAGATGCGCTGGGACGAGCTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGCCAGGAGGCC
GCCAAGAAGGCGCTCTCCGTCGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGAACGGCGGCTCGCAGGGCCG
TGACGACGGCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACACTGCTGGCGCAGA
CCCTCGCCCGGATGCTGAACGTCCCCTTCGCCATCGCCGACGCCACCGCCCTGACCGAGGCCGGCTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTGAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTAGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGACGTCTCCGGCGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGGCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGGCTGGAGAAGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGGCCAGCAACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCCCTGCTGAAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAGCTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGTCTGC
GCGCGATCATGGAGGAGGTCCTGATGTCGGTGATGTACGAGGTGCCCTCGCGCAAGGACGTGGCGCGTGTGGTGATCACC
GAGGACGTCGTCCACTCCAACGTCAACCCCACCCTGGTGCCCCGCTCCCGCGGCGAGCGCGAGCAGGGCCAGGGGCCGCG
CGAGAAGAGCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A1H8Z2G1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.271	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	95.36	0.513