NTDB

Overview

Name	recG	Type	Machinery gene
Locus tag	QQX51_RS28005	Genome accession	NZ_CP127120
Coordinates	6040972..6043047 (+)	Length	691 a.a.
NCBI ID	WP_003096624.1	Uniprot ID	A0A0H2ZJ60
Organism	Pseudomonas aeruginosa strain USA_2_BIM
Function	homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6035972..6048047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQX51_RS27975 (QQX51_27955)	-	6036394..6036774 (+)	381	WP_003096609.1	RidA family protein	-
QQX51_RS27980 (QQX51_27960)	-	6036829..6037560 (+)	732	WP_003096611.1	hypothetical protein	-
QQX51_RS27985 (QQX51_27965)	-	6037567..6038187 (-)	621	WP_023103599.1	LysE family translocator	-
QQX51_RS27990 (QQX51_27970)	-	6038254..6039054 (-)	801	WP_003114367.1	AraC family transcriptional regulator	-
QQX51_RS27995 (QQX51_27975)	-	6039054..6039905 (-)	852	WP_003121310.1	SDR family oxidoreductase	-
QQX51_RS28000 (QQX51_27980)	oxyR	6040043..6040975 (+)	933	WP_003096622.1	oxidative stress transcriptional regulator OxyR	-
QQX51_RS28005 (QQX51_27985)	recG	6040972..6043047 (+)	2076	WP_003096624.1	ATP-dependent DNA helicase RecG	Machinery gene
QQX51_RS28010 (QQX51_27990)	-	6043137..6044546 (+)	1410	WP_003098324.1	HDOD domain-containing protein	-
QQX51_RS28015 (QQX51_27995)	-	6044618..6045010 (-)	393	WP_023115664.1	hypothetical protein	-
QQX51_RS28020 (QQX51_28000)	-	6045146..6045418 (-)	273	WP_003096630.1	HU family DNA-binding protein	-
QQX51_RS28025 (QQX51_28005)	alkT	6045620..6046774 (-)	1155	WP_003098326.1	rubredoxin-NAD(+) reductase AlkT	-
QQX51_RS28030 (QQX51_28010)	-	6046826..6046993 (-)	168	WP_003098329.1	rubredoxin	-
QQX51_RS28035 (QQX51_28015)	-	6047177..6047344 (-)	168	WP_003098330.1	rubredoxin	-
QQX51_RS28040 (QQX51_28020)	-	6047478..6047879 (-)	402	WP_003098332.1	heme-binding protein	-

Sequence

Protein

Download Length: 691 a.a. Molecular weight: 76178.88 Da Isoelectric Point: 7.2591

                                >NTDB_id=770623 QQX51_RS28005 WP_003096624.1 6040972..6043047(+) (recG) [Pseudomonas aeruginosa strain USA_2_BIM]

MTELSRVPVTALKGVGAALAEKLARVGLETLQDILFHLPLRYQDRTRVTAIGALRPGADAVVEGVVAGADVVMGRRRSLL

VRLQDGSGTLSLRFYHFSQAQKDGLKRGTHLRCYGEVRPGASGLEIYHPEYRALNGDEPIPVEQTLTPIYPTTEGLTQQR

LRQLSQQALAMLGPSSLPDWLPAELARDYQLGPLDQAIRYLHRPPPDADIEELAEGRHWAQLRLAFEELLTHQLSLQRLR

EAVRSQAAPRLPAASRLPKRFLANLGFQPTGAQRRVGAEIAYDLAQDEPMLRLVQGDVGAGKTVVAALAALQAIEAGYQV

ALMAPTEILAEQHFLNFSKWLQPLDIEVAWLAGKLKGKARAAALERIGDGAPMVVGTHALFQDEVKFKRLALAIIDEQHR

FGVQQRLALRQKGVDGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRIEVIERVRAACRE

GRQAYWVCTLIEESEELTCQAAETTYEELSSALGELRVGLIHGRMKPADKAVVMEAFKEGMLQLLVATTVIEVGVDVPNA

SLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPLSQIGRERLGIMRETSDGFVIAEKDLELRGPGEMLGTRQTG

LLQFKVADLMRDADLLPAVRDAAQSLLAHWPQHVSPLLERWLRHGQQYGQV

Nucleotide

Download Length: 2076 bp

                                >NTDB_id=770623 QQX51_RS28005 WP_003096624.1 6040972..6043047(+) (recG) [Pseudomonas aeruginosa strain USA_2_BIM]

ATGACCGAGCTGTCCAGGGTCCCGGTTACCGCGCTAAAGGGCGTAGGCGCCGCGCTGGCGGAGAAGCTCGCTCGGGTAGG

CCTGGAAACCCTGCAGGATATCCTGTTCCACCTGCCCCTGCGCTACCAGGACCGTACCCGCGTCACCGCCATCGGCGCCC

TGCGGCCAGGGGCCGACGCGGTGGTCGAGGGCGTGGTGGCCGGCGCCGACGTGGTGATGGGGCGCCGCCGCAGCCTGCTG

GTGCGCCTGCAGGACGGCAGCGGCACCCTGAGCCTGCGCTTCTACCATTTCAGCCAGGCGCAGAAGGACGGTCTCAAGCG

CGGCACCCACCTGCGCTGCTACGGCGAAGTCCGGCCGGGTGCCTCGGGCCTGGAGATCTACCATCCGGAATACCGCGCGC

TGAACGGCGACGAGCCGATTCCGGTGGAGCAGACCCTGACGCCGATCTACCCGACTACCGAGGGCCTCACCCAGCAGCGC

CTGCGCCAGTTGAGCCAACAGGCCCTGGCCATGCTCGGCCCCAGCAGCCTGCCCGACTGGCTGCCGGCGGAACTGGCCCG

CGACTACCAACTTGGCCCGCTCGACCAGGCGATCCGCTACCTGCACCGGCCGCCGCCGGATGCCGACATCGAGGAACTGG

CCGAAGGCCGGCACTGGGCGCAGTTGCGCCTGGCCTTCGAAGAACTGCTGACCCACCAGTTATCCCTGCAGCGCCTGCGA

GAAGCCGTGCGCTCGCAGGCAGCGCCGCGCTTGCCGGCGGCCAGCCGCTTGCCGAAACGCTTCCTTGCCAACCTCGGCTT

CCAGCCGACCGGCGCGCAACGCCGGGTCGGCGCGGAGATCGCCTACGACCTGGCCCAGGACGAGCCGATGCTGCGCCTGG

TGCAAGGCGACGTCGGTGCCGGCAAGACCGTGGTCGCCGCCCTCGCCGCCCTGCAAGCCATAGAGGCCGGCTACCAGGTG

GCGCTGATGGCGCCGACCGAGATCCTCGCCGAGCAGCATTTCCTCAACTTCAGCAAGTGGCTCCAGCCGCTGGACATCGA

AGTCGCCTGGCTGGCCGGCAAGCTCAAGGGCAAGGCCCGCGCGGCGGCACTGGAACGCATCGGCGACGGCGCGCCGATGG

TGGTCGGCACCCACGCGCTGTTCCAGGATGAAGTGAAATTCAAGCGCCTTGCACTGGCGATCATCGACGAACAGCACCGC

TTCGGCGTGCAGCAGCGCCTGGCCCTGCGCCAGAAGGGCGTGGACGGCAGGCTCTGCCCACACCAGTTGATCATGACCGC

CACGCCGATCCCGCGGACCCTGGCGATGAGCGCCTATGCCGACCTCGACACCTCGATCCTCGACGAGCTGCCGCCCGGGC

GTACCCCGGTGAATACCGTGCTGGTGGCCGACAGCCGCCGTATCGAGGTGATCGAGCGAGTCCGCGCGGCTTGCCGCGAA

GGGCGCCAGGCCTACTGGGTGTGTACCCTGATCGAAGAGTCCGAGGAGCTTACCTGCCAGGCCGCCGAGACCACCTACGA

AGAGCTTTCCTCGGCGCTGGGCGAACTGCGTGTCGGCCTGATCCACGGGCGCATGAAGCCGGCGGACAAGGCCGTGGTGA

TGGAGGCCTTCAAGGAAGGCATGTTGCAACTGCTGGTGGCGACCACGGTGATCGAGGTCGGCGTCGACGTGCCCAACGCC

AGCCTGATGATCATCGAGAACCCCGAGCGCCTTGGCCTGGCCCAACTGCACCAGCTACGCGGCCGGGTTGGCCGGGGCAG

CGCCGCCAGCCACTGCGTGCTGCTCTACCACCCACCGCTGTCGCAGATCGGCCGCGAGCGGCTGGGCATCATGCGCGAAA

CCAGCGACGGCTTCGTCATCGCCGAGAAGGACCTGGAATTGCGCGGCCCCGGCGAAATGCTCGGCACCCGCCAGACCGGC

CTGCTGCAATTCAAGGTCGCCGACCTGATGCGCGACGCAGACCTGCTGCCGGCGGTCCGCGATGCCGCCCAATCCCTCCT

GGCGCACTGGCCGCAGCATGTCAGCCCGCTGCTCGAACGGTGGTTGCGCCACGGCCAGCAATACGGTCAAGTGTGA

Domains

Predicted by InterProScan.

DEAD/DEAH box helicase (DEAD)

(293-430)

Helicase conserved C-terminal domain (Helicase_C)

(479-586)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(614-675)

RecG wedge domain (RecG_wedge)

(12-170)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZJ60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
recG	Neisseria meningitidis strain C311	50.373	97.106	0.489
recG/mmsA	Streptococcus pneumoniae R6	40.868	96.671	0.395
recG/mmsA	Streptococcus pneumoniae R36A	40.868	96.671	0.395
recG	Bacillus subtilis subsp. subtilis str. 168	40.356	97.54	0.394

Detailed information NTG0770623