Detailed information NTG0769708

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QP019_RS00195
• Genome accession: NZ_CP126978
• Coordinates: 43704..44951 (-)
• Length: 415 a.a.
• NCBI ID: WP_013745610.1
• Uniprot ID: A0AB36DXJ3
• Organism: Gallibacterium anatis strain YJ922
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 38704..49951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QP019_RS00175 (QP019_00175)	fruK	39412..40350 (-)	939	WP_285096362.1	1-phosphofructokinase	-
QP019_RS00180 (QP019_00180)	fruB	40355..41512 (-)	1158	Protein_34	fused PTS fructose transporter subunit IIA/HPr protein	-
QP019_RS00185 (QP019_00185)	-	41732..43033 (-)	1302	WP_264780064.1	anaerobic C4-dicarboxylate transporter	-
QP019_RS00190 (QP019_00190)	-	43164..43562 (-)	399	WP_018345828.1	YbaN family protein	-
QP019_RS00195 (QP019_00195)	clpX	43704..44951 (-)	1248	WP_013745610.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
QP019_RS00200 (QP019_00200)	clpP	44963..45550 (-)	588	WP_013745609.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
QP019_RS00205 (QP019_00205)	tig	45691..46992 (-)	1302	WP_018345830.1	trigger factor	-
QP019_RS00210 (QP019_00210)	-	47164..47730 (-)	567	WP_013745607.1	cytochrome b	-
QP019_RS00215 (QP019_00215)	-	47842..48657 (+)	816	WP_039087707.1	NAD-dependent dehydratase	-

Sequence

Protein

• Length: 415 a.a.
• Molecular weight: 46156.76 Da
• Isoelectric Point: 4.9442

>NTDB_id=769708 QP019_RS00195 WP_013745610.1 43704..44951(-) (clpX) [Gallibacterium anatis strain YJ922]
MSDKPENNEKFYCSLCGKEKHEVGKLIAGVSGYICNECVETCHDLLMEEANKHQKEQEQEKPLEKLPTPHQIRAHLDDYV
IGQDQAKKILSVAVYNHYKRLRNNETDLDVELGKSNILLIGPTGSGKTLLAQTLARQINVPFAIADATTLTEAGYVGEDV
ENIIQRLLQNCDYDTEKAEQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTIASVPPQGGRKHPQQEFLKV
DTSKILFICGGAFSGLDKIIEKRTHKDRGIGFNANVQSKEKEHDIGELFAQVETEDLIKFGLIPEFVGRLPVVASLAELD
EEALIRILTVPKNALIKQYQALFTLENVELEFTPEALTAIAKKALARKTGARGLRSIVEGVLLDTMYDLPSLEGLKKVVV
DQDVIDNQALPKLEY

Nucleotide

• Length: 1248 bp

>NTDB_id=769708 QP019_RS00195 WP_013745610.1 43704..44951(-) (clpX) [Gallibacterium anatis strain YJ922]
ATGTCAGATAAACCAGAAAACAACGAAAAATTTTACTGCTCACTTTGTGGCAAAGAAAAACACGAAGTCGGCAAATTAAT
CGCCGGTGTATCCGGTTATATTTGCAATGAATGTGTGGAAACTTGCCACGATTTATTAATGGAAGAAGCCAATAAACATC
AAAAAGAGCAAGAACAGGAAAAACCGCTTGAAAAATTGCCTACTCCTCACCAAATTCGCGCACATTTGGATGATTATGTC
ATTGGACAAGATCAAGCGAAAAAAATCCTTTCCGTTGCTGTTTATAACCATTACAAACGTTTACGCAACAATGAAACCGA
TCTTGATGTTGAATTAGGCAAAAGTAACATTTTGCTTATCGGTCCGACCGGAAGCGGGAAAACATTATTGGCACAAACAT
TAGCTCGCCAAATTAATGTGCCTTTCGCCATTGCCGATGCAACTACGTTGACTGAAGCCGGTTATGTCGGTGAAGATGTG
GAAAATATTATCCAGCGGCTATTGCAAAATTGTGATTACGATACGGAAAAAGCGGAACAGGGTATTATTTATATTGATGA
AATCGATAAAATTACTCGTAAATCTGAAAATCCTTCCATTACCCGCGATGTTTCCGGTGAAGGTGTGCAACAAGCGTTAT
TAAAACTGATTGAAGGCACTATTGCCTCCGTTCCGCCTCAAGGCGGACGCAAACACCCACAGCAAGAGTTTTTGAAAGTG
GATACCTCAAAAATTCTGTTTATTTGTGGCGGTGCATTCTCTGGTTTGGATAAAATCATTGAAAAACGCACCCACAAAGA
TCGTGGAATCGGTTTTAATGCCAATGTACAAAGCAAAGAGAAAGAGCACGATATCGGTGAATTGTTCGCGCAAGTCGAAA
CTGAAGATTTAATTAAATTCGGTTTAATTCCTGAATTTGTCGGTCGTTTGCCGGTTGTAGCTTCATTGGCTGAATTGGAC
GAAGAAGCATTAATTCGCATTTTAACCGTGCCGAAAAATGCCTTAATCAAACAATATCAAGCGCTATTTACATTGGAAAA
TGTGGAGTTGGAATTCACTCCGGAAGCATTAACCGCCATTGCTAAAAAAGCACTGGCACGTAAAACCGGCGCTAGAGGAT
TACGTTCCATCGTCGAAGGCGTGCTGCTCGATACAATGTACGATCTTCCTTCTTTAGAAGGATTAAAGAAAGTCGTTGTA
GATCAGGATGTTATCGATAATCAAGCCCTACCGAAATTAGAATACTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-47)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-393)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

3D structure

• AlphaFold DB: A0AB36DXJ3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	57.212	100	0.573
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.025	95.904	0.528