Detailed information NTG0768811

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: O8413_RS10015
• Genome accession: NZ_CP115188
• Coordinates: 2157192..2158196 (-)
• Length: 334 a.a.
• NCBI ID: WP_283512490.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain MT14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2152192..2163196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O8413_RS09990 (O8413_09990)	aroK	2153072..2153590 (-)	519	WP_004728569.1	shikimate kinase AroK	-
O8413_RS09995 (O8413_09995)	pilQ	2153778..2155502 (-)	1725	WP_041942471.1	type IV pilus secretin PilQ family protein	Machinery gene
O8413_RS10000 (O8413_10000)	pilP	2155527..2156039 (-)	513	WP_143680276.1	pilus assembly protein PilP	Machinery gene
O8413_RS10005 (O8413_10005)	pilO	2156029..2156619 (-)	591	WP_158141364.1	type 4a pilus biogenesis protein PilO	Machinery gene
O8413_RS10010 (O8413_10010)	pilN	2156612..2157202 (-)	591	WP_158165891.1	PilN domain-containing protein	Machinery gene
O8413_RS10015 (O8413_10015)	pilM	2157192..2158196 (-)	1005	WP_283512490.1	type IV pilus assembly protein PilM	Machinery gene
O8413_RS10020 (O8413_10020)	-	2158341..2160821 (+)	2481	WP_283512491.1	PBP1A family penicillin-binding protein	-
O8413_RS10025 (O8413_10025)	oxyR	2160907..2161803 (-)	897	WP_014204332.1	DNA-binding transcriptional regulator OxyR	-
O8413_RS10030 (O8413_10030)	-	2161947..2162681 (+)	735	WP_004728561.1	glutathione peroxidase	-
O8413_RS10035 (O8413_10035)	-	2162805..2163068 (+)	264	WP_004728560.1	DUF3624 domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36867.12 Da
• Isoelectric Point: 6.6617

>NTDB_id=768811 O8413_RS10015 WP_283512490.1 2157192..2158196(-) (pilM) [Vibrio furnissii strain MT14]
MGKSLVTGVDIGHHSIKAVVLKPKGESYSLVGYQEIVVSDDIFADNHTLDYQKIVKKLKELKKGLPLFSRKVALAVPDNA
VISKVLQIDSDLDASEQEFAVYQAFSHQSPFPIDDLSLDFVPSGDNPAGRSTNTLYQVYATRREVVDNRLSVASKAGFEP
LLLDVQVHGLLQIWQWVSRAQQRDDWMLVDVGLTQTTLCMDFADKAPFYKDIPLGTRQWHADPTPHPVPLSESPMAGVNE
LVERIARQVQLLLSLQGHQALGGIWLSGGGATTEGLSAALAARLNLPCELFHPLTGFVTRRRMRARVPDDLQRFSTAAGL
ALRGLNWLERDHGA

Nucleotide

• Length: 1005 bp

>NTDB_id=768811 O8413_RS10015 WP_283512490.1 2157192..2158196(-) (pilM) [Vibrio furnissii strain MT14]
ATGGGTAAATCATTAGTTACAGGTGTCGATATCGGCCACCACAGTATTAAAGCGGTGGTTTTAAAACCGAAGGGCGAATC
GTATTCGCTGGTCGGCTACCAAGAAATAGTCGTATCCGACGATATTTTCGCTGATAACCACACGCTGGATTATCAGAAAA
TTGTAAAGAAACTCAAAGAACTAAAAAAGGGATTGCCGTTATTTAGTCGCAAAGTTGCGCTGGCTGTGCCGGATAATGCG
GTAATAAGTAAGGTATTACAGATAGATAGCGATTTAGATGCCAGCGAACAAGAATTTGCTGTCTATCAGGCGTTTTCCCA
TCAATCGCCGTTTCCCATCGATGATCTGAGTTTGGATTTCGTACCAAGCGGCGATAACCCCGCCGGGCGCAGCACCAACA
CCCTGTATCAAGTGTACGCCACGCGACGCGAAGTCGTCGATAACCGGTTATCGGTGGCGAGCAAAGCGGGCTTTGAGCCG
CTGCTGCTCGATGTGCAGGTGCATGGATTGCTCCAGATTTGGCAATGGGTGAGTCGCGCGCAGCAGCGCGACGATTGGAT
GCTGGTGGACGTCGGGCTAACGCAAACCACGTTATGCATGGATTTCGCCGATAAAGCGCCCTTCTATAAAGACATTCCGC
TGGGAACGCGTCAATGGCATGCCGACCCCACGCCACACCCTGTGCCGCTGAGCGAGTCACCGATGGCTGGAGTCAACGAG
CTGGTTGAACGAATTGCGCGCCAAGTGCAACTGCTGTTGTCCTTGCAGGGCCATCAAGCGCTGGGCGGAATTTGGCTGTC
GGGCGGTGGGGCGACGACGGAAGGCCTCAGCGCGGCTTTGGCTGCGCGACTGAATCTGCCGTGTGAACTGTTTCATCCGC
TGACGGGATTTGTGACGCGCCGCCGCATGCGAGCGCGTGTGCCAGACGATCTGCAACGTTTTAGTACGGCGGCTGGCTTG
GCGCTGCGCGGACTCAACTGGTTGGAGCGTGACCATGGTGCATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (239-324)

• Type IV pilus assembly protein PilM; (PilM_2) (8-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	64.012	100	0.65
pilM	Vibrio campbellii strain DS40M4	45.266	100	0.458