Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   QPK28_RS08810 Genome accession   NZ_CP126576
Coordinates   1713625..1715598 (+) Length   657 a.a.
NCBI ID   WP_003181678.1    Uniprot ID   Q65JS1
Organism   Bacillus licheniformis strain CQMB003     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1708625..1720598
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPK28_RS08785 def 1709001..1709483 (+) 483 WP_009328532.1 peptide deformylase -
  QPK28_RS08790 fmt 1709488..1710438 (+) 951 WP_003181670.1 methionyl-tRNA formyltransferase -
  QPK28_RS08795 rsmB 1710428..1711774 (+) 1347 WP_003181671.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  QPK28_RS08800 rlmN 1711771..1712859 (+) 1089 WP_025805142.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QPK28_RS08805 - 1712867..1713631 (+) 765 WP_003181675.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  QPK28_RS08810 stkP 1713625..1715598 (+) 1974 WP_003181678.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  QPK28_RS08815 rsgA 1715611..1716495 (+) 885 WP_095646448.1 ribosome small subunit-dependent GTPase A -
  QPK28_RS08820 rpe 1716499..1717155 (+) 657 WP_003181681.1 ribulose-phosphate 3-epimerase -
  QPK28_RS08825 - 1717231..1717875 (+) 645 WP_003181683.1 thiamine diphosphokinase -
  QPK28_RS08830 spoVM 1717961..1718041 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  QPK28_RS08835 rpmB 1718146..1718334 (-) 189 WP_003181685.1 50S ribosomal protein L28 -
  QPK28_RS08840 - 1718622..1718984 (+) 363 WP_003181687.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 657 a.a.        Molecular weight: 72686.52 Da        Isoelectric Point: 4.8627

>NTDB_id=767462 QPK28_RS08810 WP_003181678.1 1713625..1715598(+) (stkP) [Bacillus licheniformis strain CQMB003]
MLIGRRISGRYEILRAIGGGGMANVYLALDIILDREVAIKVLRFDFVHDADFIRRFRREAQSAASLDHPNIVSIYDVGEE
DDIYYIVMEYVEGMTLKEYINRTGPLHPKEAVQIMEQIVSAIAHAHDNQIVHRDIKPHNILIDHMGHIKVTDFGIAMALS
STTITHTNSVLGSVHYLSPEQARGGLSTKKSDIYSLGIVLFELLTARMPFEGESAVSIALKHLQSETPSVKRWNPAVPQS
IENVVLKAMAKDPFHRYEAAEEMENDLKTAFDPDRLNEKRFTIPSDDEMTKAVPIIKNLPENGSSSQSGGGEEEAAPLSK
KEKKKQAKANKKKKRKKWPLILLTVFFVLAASAVLALTVFPSLFIPKDVAVPDVAGLEYEEAVIKLEDEGFEVDPNAEDI
ADDKIEEGLIVKTDPAAGDIVKEGSTVKLYKSSGKEKTEVDDVVGQKVDAAKKLLEQKGFKNIKTEEVHDEEEAGTIIEQ
DPAAGTEIVAADDEVKLTVSLGPEAITLRDLKTYSKQAASGYLDDHQLVLVEKEAHSEDVPEGQVIKQKPEAGASVKPGD
KVEVTFSLGPKQKPVKTVTEKIDIPYEPGAAGEEQNVQISIDDEEHSISDVYENFKITAPAERTIKFRIAPGQKGYYQVT
INDKVVRSKTIEYPEDE

Nucleotide


Download         Length: 1974 bp        

>NTDB_id=767462 QPK28_RS08810 WP_003181678.1 1713625..1715598(+) (stkP) [Bacillus licheniformis strain CQMB003]
GTGTTAATCGGCAGACGGATCAGCGGACGTTACGAAATCCTGCGCGCCATCGGCGGCGGGGGGATGGCGAACGTTTATTT
AGCGCTGGACATCATCCTCGACCGTGAAGTCGCGATTAAAGTGCTGCGGTTTGACTTCGTTCACGATGCCGATTTTATCA
GGCGGTTCAGACGGGAAGCGCAGTCCGCTGCAAGCCTCGACCACCCGAATATCGTCAGCATTTATGATGTCGGAGAAGAA
GATGACATCTATTATATCGTGATGGAGTATGTCGAGGGGATGACCCTGAAAGAATACATAAATCGAACAGGCCCACTTCA
TCCGAAAGAAGCGGTCCAAATCATGGAGCAGATCGTATCCGCCATCGCACATGCCCATGATAACCAGATTGTCCACCGGG
ATATTAAGCCCCACAACATTTTGATCGACCATATGGGCCACATTAAAGTGACTGATTTCGGCATCGCCATGGCGCTCAGC
TCGACGACCATCACGCACACCAACTCGGTTTTGGGCTCTGTCCATTATTTGTCGCCCGAACAGGCGAGAGGCGGATTATC
GACGAAAAAATCCGATATCTACTCGCTCGGCATCGTGCTTTTCGAGCTGCTGACGGCGCGTATGCCGTTTGAAGGAGAAT
CGGCGGTCAGCATCGCGCTGAAACATCTCCAATCAGAAACGCCGTCGGTGAAAAGATGGAACCCGGCCGTGCCGCAAAGC
ATAGAAAACGTCGTCCTGAAAGCGATGGCAAAAGATCCATTCCATCGCTATGAAGCGGCCGAAGAGATGGAAAACGATTT
GAAAACGGCTTTCGACCCGGACCGGCTCAACGAAAAGCGCTTCACGATTCCATCCGATGATGAGATGACGAAAGCAGTTC
CGATCATCAAGAATCTGCCGGAAAACGGGAGCAGCTCGCAATCCGGCGGCGGAGAAGAGGAAGCGGCTCCATTATCAAAA
AAAGAAAAGAAGAAGCAGGCAAAAGCAAACAAGAAGAAAAAAAGAAAGAAATGGCCGCTTATATTGCTGACGGTGTTTTT
CGTTCTGGCTGCGTCAGCCGTCTTGGCTTTAACGGTGTTTCCGTCGCTCTTTATTCCGAAAGATGTGGCCGTTCCCGATG
TTGCCGGCCTTGAATATGAAGAAGCCGTCATCAAGCTTGAAGACGAAGGATTTGAAGTTGATCCGAATGCTGAAGACATT
GCCGACGATAAAATTGAAGAAGGGCTGATCGTGAAGACGGACCCTGCAGCCGGCGATATCGTGAAGGAAGGTTCAACTGT
CAAGCTATATAAAAGCTCAGGCAAAGAGAAAACTGAAGTCGATGATGTGGTCGGCCAGAAAGTCGATGCCGCCAAGAAGC
TTCTTGAGCAAAAAGGCTTTAAAAACATCAAGACAGAAGAAGTGCACGATGAAGAAGAAGCGGGAACCATCATCGAACAG
GACCCTGCAGCCGGAACCGAAATCGTTGCCGCCGACGACGAGGTCAAATTAACGGTCAGCCTCGGTCCGGAAGCCATTAC
TTTAAGGGATTTAAAAACATACAGCAAACAGGCGGCTTCGGGCTATTTGGACGACCATCAGCTTGTCCTTGTCGAAAAGG
AGGCGCATTCTGAAGACGTGCCGGAAGGTCAGGTCATTAAACAAAAGCCGGAGGCGGGGGCATCAGTCAAGCCGGGAGAC
AAAGTCGAGGTCACGTTTTCTCTCGGACCTAAACAAAAGCCCGTCAAAACGGTGACCGAGAAAATTGATATTCCTTATGA
ACCGGGAGCGGCGGGCGAAGAACAAAACGTCCAAATTTCGATCGATGATGAAGAACACAGCATTTCTGACGTCTACGAAA
ATTTCAAAATCACAGCGCCGGCAGAGCGGACGATCAAATTCAGGATTGCGCCCGGCCAAAAAGGGTATTATCAAGTAACG
ATCAACGATAAAGTAGTCAGGTCAAAAACGATTGAATATCCTGAGGATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65JS1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

41.356

89.802

0.371

  stkP Streptococcus pneumoniae D39

41.186

89.802

0.37

  stkP Streptococcus pneumoniae R6

41.186

89.802

0.37

  stkP Streptococcus pneumoniae Rx1

41.017

89.802

0.368