Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QPK28_RS06990 Genome accession   NZ_CP126576
Coordinates   1385031..1386332 (-) Length   433 a.a.
NCBI ID   WP_011201620.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CQMB003     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1380031..1391332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPK28_RS06970 - 1380579..1381463 (+) 885 WP_003180929.1 carbohydrate ABC transporter permease -
  QPK28_RS06975 - 1381501..1382829 (-) 1329 WP_009328706.1 amino acid permease -
  QPK28_RS06980 - 1383149..1384102 (+) 954 WP_011197826.1 ring-cleaving dioxygenase -
  QPK28_RS06985 - 1384495..1384857 (+) 363 WP_003180937.1 hypothetical protein -
  QPK28_RS06990 htrA 1385031..1386332 (-) 1302 WP_011201620.1 trypsin-like peptidase domain-containing protein Regulator
  QPK28_RS06995 proG 1386488..1387300 (+) 813 WP_009328703.1 pyrroline-5-carboxylate reductase ProG -
  QPK28_RS07000 - 1387516..1388340 (+) 825 WP_009328702.1 M55 family metallopeptidase -
  QPK28_RS07005 - 1388356..1389282 (+) 927 WP_009328701.1 ABC transporter permease -
  QPK28_RS07010 - 1389287..1390246 (+) 960 WP_009328700.1 ABC transporter permease -
  QPK28_RS07015 - 1390254..1391252 (+) 999 WP_009328699.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 433 a.a.        Molecular weight: 45707.96 Da        Isoelectric Point: 4.7712

>NTDB_id=767451 QPK28_RS06990 WP_011201620.1 1385031..1386332(-) (htrA) [Bacillus licheniformis strain CQMB003]
MMEYNREDQLETKNELIVSDQKPDQAIKKAEQQKRRLSWMTPILSGIIGGSLVLGVTTYQHSKDETANTSVQTQTNETSN
SSASSTKANTEKLSSTNSSDISTMVENVSPAIVGISNYQKQTESGMFGFESNSSSSSEQETGTGSGVIYKKANGKAYIIT
NNHVVEGASKLTVSLSNGKEVEGKLLGSDSLTDLAVVEISADHVEKVASFGDSSSLKAGESVIAIGNPLGKDLSRTVTQG
IISGVDRTVSVDTSAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPIAEELMSK
GKIERPFIGIGMMDLEQVPENYQTGTLGLSGSQLNKGVYIRQVASGSPAEKAGLKENDVIVSFNGKETDTGSALRNLLYN
DAKIGDTVKVTLIRNGKTMTKQITLDQKESASS

Nucleotide


Download         Length: 1302 bp        

>NTDB_id=767451 QPK28_RS06990 WP_011201620.1 1385031..1386332(-) (htrA) [Bacillus licheniformis strain CQMB003]
ATGATGGAATATAATAGAGAAGATCAGCTTGAAACAAAAAACGAACTCATCGTCTCCGATCAAAAGCCCGACCAGGCGAT
AAAAAAAGCAGAACAGCAAAAGCGGAGACTCTCGTGGATGACGCCGATTCTCAGCGGCATCATCGGAGGAAGCCTCGTTC
TCGGCGTCACGACATACCAGCATAGCAAAGACGAAACGGCCAATACATCCGTCCAGACGCAAACAAACGAGACGTCGAAC
TCATCGGCTTCTTCCACTAAAGCGAATACCGAAAAATTGTCCAGCACCAATTCGTCCGACATTTCTACAATGGTTGAAAA
TGTATCTCCCGCCATCGTCGGTATTTCAAACTATCAAAAACAAACAGAGAGCGGTATGTTCGGTTTTGAAAGCAACAGCA
GCAGCTCAAGCGAACAAGAAACAGGCACAGGCTCAGGTGTCATCTATAAAAAAGCAAACGGCAAAGCATACATTATTACA
AATAACCACGTTGTCGAAGGCGCGTCTAAACTGACGGTTTCCCTGTCCAACGGCAAAGAAGTGGAAGGTAAATTGCTGGG
CAGCGATTCGTTGACAGACCTTGCCGTTGTTGAAATTTCCGCTGATCACGTGGAAAAAGTCGCCTCTTTCGGCGATTCGT
CAAGCTTGAAAGCAGGCGAATCGGTGATCGCTATTGGAAACCCGCTCGGCAAAGATCTGTCCCGCACGGTGACACAAGGC
ATCATCAGCGGTGTTGATCGGACCGTTTCCGTAGATACATCCGCAGGCCAAACCGAGATGAACGTCATTCAAACCGACGC
GGCCATCAACCCCGGCAACAGCGGAGGCGCCCTTTTGAATACAAAGGGTGAAGTGATCGGCATCAACAGCATGAAAATCA
GTGAAAGCGGAGTAGAAGGCATCGGATTTGCGATTCCAAGCAATGATGTCAAACCGATTGCAGAAGAGCTGATGTCTAAA
GGAAAAATTGAGCGCCCGTTCATCGGAATCGGCATGATGGATCTTGAGCAGGTGCCGGAAAACTATCAAACAGGCACCCT
CGGATTAAGCGGCAGCCAGTTAAACAAAGGCGTCTACATCCGCCAGGTCGCTTCAGGCTCCCCAGCTGAAAAAGCGGGCC
TTAAAGAGAACGATGTCATCGTCAGCTTTAACGGAAAAGAAACCGATACAGGAAGCGCGCTGCGCAACCTTCTTTACAAC
GATGCAAAAATCGGGGATACGGTAAAGGTTACCCTCATTCGAAACGGCAAAACCATGACAAAACAAATCACCCTTGACCA
GAAAGAATCCGCATCATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

42.04

92.841

0.39

  htrA Streptococcus gordonii str. Challis substr. CH1

38.971

94.226

0.367

  htrA Streptococcus mitis NCTC 12261

43.733

82.91

0.363