Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   O6R09_RS06725 Genome accession   NZ_CP114883
Coordinates   1319000..1319809 (-) Length   269 a.a.
NCBI ID   WP_269725550.1    Uniprot ID   -
Organism   Streptococcus alactolyticus strain LGM     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1314000..1324809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O6R09_RS06715 (O6R09_06715) smc 1314458..1317997 (-) 3540 WP_235280760.1 chromosome segregation protein SMC -
  O6R09_RS06720 (O6R09_06720) rnc 1318109..1318795 (-) 687 WP_269725549.1 ribonuclease III -
  O6R09_RS06725 (O6R09_06725) vicX 1319000..1319809 (-) 810 WP_269725550.1 MBL fold metallo-hydrolase Regulator
  O6R09_RS06730 (O6R09_06730) vicK 1319810..1321153 (-) 1344 WP_154455018.1 cell wall metabolism sensor histidine kinase VicK Regulator
  O6R09_RS06735 (O6R09_06735) vicR 1321146..1321856 (-) 711 WP_269725551.1 response regulator YycF Regulator
  O6R09_RS06740 (O6R09_06740) - 1322147..1322911 (+) 765 WP_167829297.1 amino acid ABC transporter ATP-binding protein -
  O6R09_RS06745 (O6R09_06745) - 1322926..1323738 (+) 813 WP_269725552.1 transporter substrate-binding domain-containing protein -
  O6R09_RS06750 (O6R09_06750) - 1323753..1324451 (+) 699 WP_154455015.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30259.15 Da        Isoelectric Point: 5.7242

>NTDB_id=767341 O6R09_RS06725 WP_269725550.1 1319000..1319809(-) (vicX) [Streptococcus alactolyticus strain LGM]
MSDSSFKYSILASGSTGNSFYVETPKKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFVTHEHSDHIKGVGVLARRYHLD
IYANEKTWETIDSHQMIGKLDNVQKHVFERGKLMTFGDIDIESFGVSHDAVDPQFYRLMKDDKSFVLLTDTGYVSDRMAG
MIENADGYLIEANHDVDILRSGAYPWSLKQRILSDKGHLSNEDGAQTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMQADFGVGNDMTVHDTSPDEATPLTIL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=767341 O6R09_RS06725 WP_269725550.1 1319000..1319809(-) (vicX) [Streptococcus alactolyticus strain LGM]
ATGTCAGACAGTAGTTTTAAATATAGTATTTTAGCTTCTGGTTCAACAGGAAATTCCTTTTATGTCGAAACGCCTAAAAA
GCGTTTTTTAATCGATGCGGGGTTGACAGGTAAGAAAATCACGAGTTTGCTGGCTGAAATTGACCGTAAGCCAGAGGATT
TGGATGCTATCTTTGTCACTCACGAGCACTCTGACCATATTAAGGGTGTTGGGGTTCTAGCGCGTCGCTATCACCTTGAC
ATCTATGCCAATGAAAAAACGTGGGAAACCATTGATAGCCACCAAATGATTGGGAAATTGGACAATGTGCAAAAGCACGT
TTTTGAACGTGGCAAACTCATGACCTTTGGTGACATTGATATCGAAAGTTTTGGGGTTAGTCATGACGCTGTGGACCCTC
AATTTTACCGTTTGATGAAGGATGATAAGTCTTTTGTCTTGTTGACAGATACGGGTTATGTGAGTGACCGCATGGCTGGT
ATGATTGAAAATGCCGATGGTTATCTCATTGAAGCCAATCACGATGTGGATATTTTGCGTTCAGGAGCCTATCCTTGGAG
TTTGAAACAACGCATTTTGTCTGACAAGGGACACTTGTCCAATGAGGACGGTGCCCAAACCATGATTCGCACCATTGGTA
ACCGCACGAAAAAGATTTACCTAGGGCATTTGAGCAAGGAAAATAATATTAAAGAATTGGCGCACATGACCATGGAAAAT
AATCTCATGCAGGCTGATTTTGGGGTAGGAAATGACATGACGGTCCATGATACTTCACCAGATGAAGCGACGCCATTAAC
AATTCTTTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

74.906

99.257

0.743