Detailed information NTG0766855

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: O4M77_RS13410
• Genome accession: NZ_CP114606
• Coordinates: 2818322..2819743 (+)
• Length: 473 a.a.
• NCBI ID: WP_373684718.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YWS30-1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2813322..2824743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O4M77_RS13390 (O4M77_13380)	thrC	2813608..2814747 (+)	1140	WP_323713569.1	threonine synthase	-
O4M77_RS13395 (O4M77_13385)	-	2814807..2815859 (-)	1053	WP_034703413.1	serine hydrolase	-
O4M77_RS13400 (O4M77_13390)	-	2816076..2816711 (+)	636	WP_005233474.1	response regulator	-
O4M77_RS13405 (O4M77_13395)	pilS	2816739..2818304 (+)	1566	WP_180016630.1	sensor histidine kinase	Regulator
O4M77_RS13410 (O4M77_13400)	pilR	2818322..2819743 (+)	1422	WP_373684718.1	sigma-54-dependent transcriptional regulator	Regulator
O4M77_RS13415 (O4M77_13405)	-	2819744..2820916 (-)	1173	WP_034703419.1	S41 family peptidase	-
O4M77_RS13420 (O4M77_13410)	gpmI	2820940..2822487 (-)	1548	WP_323713570.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
O4M77_RS13425 (O4M77_13415)	lptG	2822612..2823682 (-)	1071	WP_323713571.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53647.82 Da
• Isoelectric Point: 6.2030

>NTDB_id=766855 O4M77_RS13410 WP_373684718.1 2818322..2819743(+) (pilR) [Acinetobacter sp. YWS30-1]
MVEQQPLVLLVDDEEDLCTLMQMSLMRMGIRTHIAHRLEDAKKCLRDHQYDACLTDLNLPDGNGLQLLDWINQHSPHLPV
AVLTAYGNMEIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYYQNNSNDSLEHKLLIGQSLPIQQLRVTLKKIAR
SQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLD
EIAELPLSMQVKLLRAVQEKRIRPVGSDTEIDVDFRVISASHQDLDALVQQGKFRQDLFFRIHVMDLVLPPLRERGQDIL
LLAEHFIQKICQEWEIPAKKLTERSKEFLLEQYYPGNVRELRNIIERAITLSDEDKIDLQHLQTAPLRHLAPVLSETANL
AEPTSSTDQIIIPKKLPEEGLELYLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEEEE

Nucleotide

• Length: 1422 bp

>NTDB_id=766855 O4M77_RS13410 WP_373684718.1 2818322..2819743(+) (pilR) [Acinetobacter sp. YWS30-1]
ATTGTGGAACAACAACCACTGGTTTTATTGGTGGATGATGAGGAAGATCTATGTACCCTCATGCAAATGTCATTGATGCG
CATGGGAATCCGTACGCATATTGCCCATCGTCTGGAAGATGCAAAAAAATGTCTTAGGGATCATCAATATGATGCCTGTC
TGACAGATCTAAATCTTCCTGATGGCAATGGTCTGCAATTACTGGACTGGATTAACCAGCATTCCCCTCACCTTCCGGTA
GCTGTTCTAACGGCCTATGGTAATATGGAAATTGCCATTGCTGCACTCAAGGCAGGTGCATTTGACTTTGTCAGCAAACC
GATTAATCAAAAGCATCTGGAACAACTGCTGCAAAAAGCGCTAAATAAACCAGTAGACTATTATCAGAATAATTCCAATG
ACTCATTAGAGCATAAGCTGCTAATTGGACAATCCCTGCCTATTCAGCAATTACGTGTCACCTTGAAAAAAATTGCCCGC
TCTCAGGCACCCGTATTTATTACTGGCGAATCAGGTACCGGGAAGGAAGTGGTGGCCAATCTGGTTCATCGTCTCAGCAA
TCGCAATGAAGGGCCTTTTATCGCAATTAACTGCGGTGCAATTCCGACTGAACTGATGGAAAGTGAACTGTTTGGCCATA
AGAAAGGCAGCTTTACGGGTGCGACTCAGGACAAGCAGGGACTGATTCAGTCTGCCCATGGAGGCAGTTTGTTCTTAGAT
GAGATTGCTGAATTACCGCTATCTATGCAGGTCAAACTGTTACGTGCCGTCCAGGAAAAACGCATTCGTCCAGTCGGTTC
TGACACTGAAATTGATGTCGATTTCCGTGTCATCAGTGCCAGCCATCAGGATCTCGATGCATTGGTACAACAAGGCAAAT
TCCGTCAGGACTTGTTCTTTCGTATTCATGTGATGGATCTGGTCTTACCACCCCTGCGTGAGCGCGGCCAGGATATTCTG
CTCCTCGCTGAGCATTTTATTCAAAAGATCTGCCAGGAATGGGAGATTCCTGCGAAAAAACTGACGGAACGGAGCAAGGA
ATTTTTACTGGAGCAATACTATCCGGGCAATGTACGCGAACTGCGTAATATTATTGAACGCGCAATTACTTTGAGTGATG
AAGACAAGATTGATCTTCAGCATCTGCAAACTGCTCCACTGCGTCATCTGGCACCTGTCTTATCAGAAACGGCAAATCTG
GCAGAGCCGACCTCATCTACGGATCAGATCATTATTCCCAAGAAACTCCCCGAGGAAGGTCTGGAACTGTATTTAGAAAA
GATTGAAAAAGAAATTCTGCTGAATGCTTTGAATCTGACGCATTGGAATCGTACATTGGCCGCCAAAAAACTCGGTATGT
CGTTTCGCTCTTTACGTTATCGTCTGAAAAAATTCGGACTGGATACCGAAGAAGAGGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	75.676	100	0.77
pilR	Pseudomonas aeruginosa PAK	49.024	97.463	0.478