Detailed information NTG0766545

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: QNH30_RS13910
• Genome accession: NZ_CP126082
• Coordinates: 2678512..2679117 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain C1_13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2673512..2684117

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH30_RS13880 (QNH30_13880)	-	2674325..2674714 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
QNH30_RS13885 (QNH30_13885)	yajC	2674771..2675037 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
QNH30_RS13890 (QNH30_13890)	tgt	2675074..2676219 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
QNH30_RS13895 (QNH30_13895)	queA	2676246..2677274 (-)	1029	WP_041850173.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
QNH30_RS13900 (QNH30_13900)	yrzS	2677304..2677504 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
QNH30_RS13905 (QNH30_13905)	ruvB	2677497..2678501 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QNH30_RS13910 (QNH30_13910)	ruvA	2678512..2679117 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
QNH30_RS13915 (QNH30_13915)	bofC	2679256..2679768 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
QNH30_RS13920 (QNH30_13920)	csbX	2679816..2681123 (-)	1308	WP_015483512.1	MFS transporter	-
QNH30_RS13925 (QNH30_13925)	iolG	2681194..2682219 (-)	1026	WP_032726305.1	inositol 2-dehydrogenase	-
QNH30_RS13930 (QNH30_13930)	yrzF	2682457..2683104 (+)	648	WP_003246159.1	phosphotransferase	-
QNH30_RS13935 (QNH30_13935)	-	2683150..2683272 (-)	123	WP_003229707.1	hypothetical protein	-
QNH30_RS13940 (QNH30_13940)	-	2683435..2683803 (+)	369	WP_172655417.1	DUF5412 family protein	-
QNH30_RS13945 (QNH30_13945)	-	2683810..2683950 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=766545 QNH30_RS13910 WP_003229717.1 2678512..2679117(-) (ruvA) [Bacillus subtilis strain C1_13]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=766545 QNH30_RS13910 WP_003229717.1 2678512..2679117(-) (ruvA) [Bacillus subtilis strain C1_13]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATAATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408