Detailed information NTG0766025

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: QNK08_RS13895
• Genome accession: NZ_CP125983
• Coordinates: 2577663..2578268 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain ZKY04
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2572663..2583268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK08_RS13865 (QNK08_13890)	-	2573476..2573865 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
QNK08_RS13870 (QNK08_13895)	yajC	2573922..2574188 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
QNK08_RS13875 (QNK08_13900)	tgt	2574225..2575370 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
QNK08_RS13880 (QNK08_13905)	queA	2575397..2576425 (-)	1029	WP_014477530.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
QNK08_RS13885 (QNK08_13910)	yrzS	2576455..2576655 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
QNK08_RS13890 (QNK08_13915)	ruvB	2576648..2577652 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QNK08_RS13895 (QNK08_13920)	ruvA	2577663..2578268 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
QNK08_RS13900 (QNK08_13925)	bofC	2578407..2578919 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
QNK08_RS13905 (QNK08_13930)	csbX	2578967..2580274 (-)	1308	WP_014480439.1	MFS transporter	-
QNK08_RS13910 (QNK08_13935)	iolG	2580345..2581370 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
QNK08_RS13915 (QNK08_13940)	yrzF	2581608..2582255 (+)	648	WP_014480441.1	phosphotransferase	-
QNK08_RS13920 (QNK08_13945)	-	2582301..2582423 (-)	123	WP_003229707.1	hypothetical protein	-
QNK08_RS13925 (QNK08_13955)	-	2582586..2582954 (+)	369	WP_186437837.1	DUF5412 family protein	-
QNK08_RS13930 (QNK08_13960)	-	2582961..2583101 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=766025 QNK08_RS13895 WP_003229717.1 2577663..2578268(-) (ruvA) [Bacillus subtilis strain ZKY04]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=766025 QNK08_RS13895 WP_003229717.1 2577663..2578268(-) (ruvA) [Bacillus subtilis strain ZKY04]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408