Detailed information NTG0765727

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: QNK07_RS14280
• Genome accession: NZ_CP125981
• Coordinates: 2729449..2730054 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain ZKY06
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2724449..2735054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK07_RS14250 (QNK07_14270)	-	2725262..2725651 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
QNK07_RS14255 (QNK07_14275)	yajC	2725708..2725974 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
QNK07_RS14260 (QNK07_14280)	tgt	2726011..2727156 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
QNK07_RS14265 (QNK07_14285)	queA	2727183..2728211 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
QNK07_RS14270 (QNK07_14290)	yrzS	2728241..2728441 (-)	201	WP_015714444.1	DUF2905 domain-containing protein	-
QNK07_RS14275 (QNK07_14295)	ruvB	2728434..2729438 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
QNK07_RS14280 (QNK07_14300)	ruvA	2729449..2730054 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
QNK07_RS14285 (QNK07_14305)	bofC	2730193..2730705 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
QNK07_RS14290 (QNK07_14310)	csbX	2730753..2732060 (-)	1308	WP_003246197.1	MFS transporter	-
QNK07_RS14295 (QNK07_14315)	iolG	2732131..2733156 (-)	1026	WP_015714446.1	inositol 2-dehydrogenase	-
QNK07_RS14300 (QNK07_14320)	yrzF	2733394..2734041 (+)	648	WP_032722259.1	phosphotransferase	-
QNK07_RS14305 (QNK07_14325)	-	2734087..2734209 (-)	123	WP_003229707.1	hypothetical protein	-
QNK07_RS14310 (QNK07_14335)	-	2734372..2734740 (+)	369	WP_021480229.1	DUF5412 family protein	-
QNK07_RS14315 (QNK07_14340)	-	2734747..2734887 (+)	141	WP_029727127.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=765727 QNK07_RS14280 WP_003229717.1 2729449..2730054(-) (ruvA) [Bacillus subtilis strain ZKY06]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=765727 QNK07_RS14280 WP_003229717.1 2729449..2730054(-) (ruvA) [Bacillus subtilis strain ZKY06]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408