Detailed information NTG0765696

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OZ656_RS04140
• Genome accession: NZ_CP114373
• Coordinates: 891348..892736 (-)
• Length: 462 a.a.
• NCBI ID: WP_379944991.1
• Uniprot ID: -
• Organism: Marinobacter sp. LM1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 886348..897736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZ656_RS04120 (OZ656_04105)	-	886533..889925 (+)	3393	WP_379944989.1	pilus assembly protein	-
OZ656_RS04125 (OZ656_04110)	-	889965..890291 (+)	327	WP_278350810.1	hypothetical protein	-
OZ656_RS04130 (OZ656_04115)	-	890288..890704 (+)	417	WP_278350811.1	type IV pilin protein	-
OZ656_RS04135	-	890706..891266 (-)	561	WP_379944990.1	GspH/FimT family pseudopilin	-
OZ656_RS04140 (OZ656_04120)	pilR	891348..892736 (-)	1389	WP_379944991.1	sigma-54-dependent transcriptional regulator	Regulator
OZ656_RS04145 (OZ656_04125)	-	892786..894432 (-)	1647	WP_379944992.1	sensor histidine kinase	-
OZ656_RS04150 (OZ656_04130)	-	894525..896189 (+)	1665	WP_379944993.1	NAD+ synthase	-
OZ656_RS04155 (OZ656_04135)	-	896198..897031 (-)	834	WP_379944994.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 462 a.a.
• Molecular weight: 50586.68 Da
• Isoelectric Point: 4.7478

>NTDB_id=765696 OZ656_RS04140 WP_379944991.1 891348..892736(-) (pilR) [Marinobacter sp. LM1]
MTTQTALIVDDEPDIRDLLEITLTRMGITTYTAPDLASARELLQQHNPQLCLTDMNLPDGNGIDLVHWIQQHTPCTPVAV
ITAYGSMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPQTGETAESDEPGLLLGDSPQIRKLRTQTKKLARSQA
PVFISGESGSGKELVARMIHLQGPRSDGPFVAVNCGAIPSELMESEFFGHKKGSFTGAVENKQGLFRSADGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGDFRQDLFYRINVIELAVPPLRERADDIPLLA
KHILQRIAREYECDPAKLTPAAIERLKGYEFPGNVRELENILERAFTLCDEDLIDAGDLHLGGGVAPAGSASAVNETGSD
TDAPSPPMPEGEIDLEGYLESIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME

Nucleotide

• Length: 1389 bp

>NTDB_id=765696 OZ656_RS04140 WP_379944991.1 891348..892736(-) (pilR) [Marinobacter sp. LM1]
ATGACTACACAGACAGCGCTGATTGTTGACGACGAGCCGGATATCCGGGATCTACTGGAAATCACCCTCACCCGGATGGG
CATTACCACCTACACCGCCCCCGATCTGGCCAGCGCCAGGGAACTACTGCAGCAGCACAATCCCCAGCTCTGCCTGACAG
ACATGAACCTGCCCGACGGCAATGGTATAGACCTTGTTCACTGGATTCAGCAACACACTCCCTGCACCCCCGTTGCAGTG
ATCACCGCCTATGGCAGCATGGACACGGCTATCGAATCGCTCAAAGCCGGCGCTTTTGACTTCGTATCCAAGCCCGTGGA
GCTGCCCCGCCTGCGGGAACTGGTCAACAGCGCTCTGAAGCTGTCAGAACCCCAGACCGGCGAAACCGCCGAGTCCGATG
AGCCCGGCCTGCTTCTGGGCGACTCGCCGCAAATCCGGAAACTGCGCACACAGACGAAAAAGCTCGCCAGAAGCCAGGCA
CCGGTGTTTATCAGCGGCGAATCCGGCAGCGGCAAGGAGCTGGTTGCCCGCATGATTCATCTGCAAGGGCCCAGAAGTGA
CGGCCCCTTTGTCGCCGTGAACTGTGGCGCAATCCCCTCGGAATTGATGGAAAGCGAGTTCTTTGGCCACAAGAAGGGCA
GTTTCACCGGCGCTGTCGAAAACAAGCAGGGCCTGTTCCGCTCCGCCGATGGTGGCACCCTGTTTCTGGACGAAGTGGCC
GACCTGCCCCTGGCCATGCAGGTAAAACTTCTGCGGGCCATTCAGGAGAAAGCCGTTCGTCCGGTCGGTGACACCAAAGA
AGTGCCGGTGGATATCCGGGTGCTCAGCGCCACCCATAAAAACCTCCCGGAACTGGTGCAGGAAGGCGACTTCCGCCAGG
ATCTGTTCTACCGGATCAACGTGATCGAACTGGCTGTTCCGCCGCTGCGTGAGCGCGCGGATGATATTCCCTTGCTGGCA
AAACACATTCTCCAACGCATAGCCCGGGAATACGAATGCGACCCGGCCAAACTCACCCCGGCCGCCATCGAACGACTCAA
AGGCTACGAGTTTCCCGGTAACGTGCGGGAACTGGAGAACATTCTGGAGCGCGCTTTTACCCTGTGCGACGAAGACCTGA
TTGATGCCGGGGATCTGCATCTTGGCGGCGGTGTTGCGCCAGCGGGCTCGGCCTCGGCTGTCAACGAAACGGGCTCAGAT
ACCGACGCCCCCTCTCCCCCGATGCCTGAGGGTGAAATAGACCTTGAGGGATATCTGGAGAGTATCGAGCGGCAGGCCAT
CGAAAAAGCACTGGAGGCAACGAGGTGGAATAAAACGGCAGCGGCCAAAAGACTGGGGATCAGCTTTCGGGCATTGCGGT
ATCGGTTGAAGAAGTTGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (419-459)

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	64.516	100	0.649
pilR	Acinetobacter baumannii strain A118	53.68	100	0.537
luxO	Vibrio cholerae strain A1552	36.865	98.052	0.361