Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   O1450_RS11905 Genome accession   NZ_CP114256
Coordinates   2502093..2502476 (-) Length   127 a.a.
NCBI ID   WP_004652356.1    Uniprot ID   A0A2N0WJ47
Organism   Acinetobacter sp. TR11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2497093..2507476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1450_RS11890 (O1450_11890) - 2499000..2501087 (-) 2088 WP_269228581.1 methyl-accepting chemotaxis protein -
  O1450_RS11895 (O1450_11895) - 2501135..2501671 (-) 537 WP_269228582.1 chemotaxis protein CheW -
  O1450_RS11900 (O1450_11900) - 2501711..2502073 (-) 363 WP_004664659.1 response regulator -
  O1450_RS11905 (O1450_11905) pilG 2502093..2502476 (-) 384 WP_004652356.1 twitching motility response regulator PilG Regulator
  O1450_RS11910 (O1450_11910) - 2502757..2503413 (+) 657 WP_269228583.1 hypothetical protein -
  O1450_RS11915 (O1450_11915) - 2503604..2505319 (+) 1716 WP_269228584.1 proline--tRNA ligase -
  O1450_RS11920 (O1450_11920) - 2505377..2505712 (-) 336 WP_269228585.1 YegP family protein -
  O1450_RS11925 (O1450_11925) - 2505860..2506204 (-) 345 WP_269228586.1 zinc ribbon domain-containing protein YjdM -
  O1450_RS11930 (O1450_11930) - 2506271..2506612 (-) 342 WP_269228587.1 DUF488 family protein -
  O1450_RS11935 (O1450_11935) - 2506642..2506977 (-) 336 WP_269228588.1 DUF2004 domain-containing protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14226.35 Da        Isoelectric Point: 4.7278

>NTDB_id=765258 O1450_RS11905 WP_004652356.1 2502093..2502476(-) (pilG) [Acinetobacter sp. TR11]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=765258 O1450_RS11905 WP_004652356.1 2502093..2502476(-) (pilG) [Acinetobacter sp. TR11]
ATGGAAGATAAATTTCAAAATTTGAAGGTAATGGTGATTGACGATTCAAAAACGATTCGTCGTACAGCTGAAACGCTTTT
ACAACGAGAAGGTTGTGAGGTGATCACCGCTGTTGATGGTTTTGAAGCATTATCAAAAATTGCAGAAGCAAATCCTGATA
TCGTGTTCGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACCTGTGCACTGATTAAAAATTCTTTAAATTATCAA
AATATCCCAGTGATTATGTTGTCAAGCAAAGACGGTTTGTTTGATCAGGCTAAAGGGCGTGTTGTGGGTTCTGATGAATA
TTTAACTAAGCCATTTAGTAAAGATGAGCTGTTAAATGCGATTCGTAATCACGTTAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N0WJ47

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

97.638

100

0.976
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37