Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   O1450_RS02710 Genome accession   NZ_CP114256
Coordinates   563474..563902 (+) Length   142 a.a.
NCBI ID   WP_269229609.1    Uniprot ID   A0A9E9NN21
Organism   Acinetobacter sp. TR11     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 558474..568902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1450_RS02695 (O1450_02695) - 559480..561786 (+) 2307 WP_269229606.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  O1450_RS02700 (O1450_02700) - 561831..562604 (-) 774 WP_269229607.1 SDR family oxidoreductase -
  O1450_RS02705 (O1450_02705) mazG 562699..563505 (+) 807 WP_269229608.1 nucleoside triphosphate pyrophosphohydrolase -
  O1450_RS02710 (O1450_02710) comEA 563474..563902 (+) 429 WP_269229609.1 ComEA family DNA-binding protein Machinery gene
  O1450_RS02715 (O1450_02715) pcnB 564041..565495 (+) 1455 WP_269229610.1 polynucleotide adenylyltransferase PcnB -
  O1450_RS02720 (O1450_02720) folK 565492..565980 (+) 489 WP_269229611.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  O1450_RS02725 (O1450_02725) panB 566019..566828 (+) 810 WP_269229612.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  O1450_RS02730 (O1450_02730) panC 566832..567677 (+) 846 WP_269229613.1 pantoate--beta-alanine ligase -
  O1450_RS02735 (O1450_02735) rapZ 567701..568552 (+) 852 WP_269229614.1 RNase adapter RapZ -
  O1450_RS02740 (O1450_02740) - 568549..568818 (+) 270 WP_087545614.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 16041.27 Da        Isoelectric Point: 10.3625

>NTDB_id=765247 O1450_RS02710 WP_269229609.1 563474..563902(+) (comEA) [Acinetobacter sp. TR11]
MNLPQLRSKHNLFLFIFIYLGCFSSVDAQPFDQSYEKWKAQQQARDQQLAKQPNNNYYLSRPTAQQGSKQVSSSVNIQGD
KISLNQANLQQLQTLNGVGEKKAQAIVEYRQKNGGFKTIDELVNVKGIGPKLLEKNKARLGL

Nucleotide


Download         Length: 429 bp        

>NTDB_id=765247 O1450_RS02710 WP_269229609.1 563474..563902(+) (comEA) [Acinetobacter sp. TR11]
ATGAATTTGCCGCAGCTACGCAGCAAACATAATCTTTTTTTATTCATTTTTATATATTTAGGGTGTTTTTCATCTGTAGA
TGCGCAGCCATTCGATCAATCCTATGAAAAATGGAAAGCGCAACAACAGGCACGTGATCAGCAATTGGCGAAGCAACCAA
ACAATAATTATTATTTATCAAGACCCACGGCACAACAAGGTTCAAAGCAAGTTTCATCTTCTGTAAACATTCAAGGAGAT
AAAATTAGTTTGAACCAAGCAAATTTACAGCAGCTACAAACGTTGAATGGCGTGGGTGAGAAAAAAGCTCAGGCAATTGT
TGAATATCGCCAAAAGAATGGTGGTTTTAAAACGATAGATGAGTTGGTCAATGTAAAAGGAATTGGACCCAAATTGCTTG
AGAAAAATAAAGCACGCTTAGGATTATAG

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(80-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

52.206

95.775

0.5
  comEA Acinetobacter baumannii D1279779

48.148

95.07

0.458
  comEA Acinetobacter baylyi ADP1

45.588

95.775

0.437