Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   O0R49_RS15955 Genome accession   NZ_CP114177
Coordinates   3018706..3020997 (-) Length   763 a.a.
NCBI ID   WP_269195572.1    Uniprot ID   -
Organism   Bacillus safensis strain PLA 1006     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3013706..3025997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R49_RS15915 (O0R49_15915) - 3014097..3014528 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  O0R49_RS15920 (O0R49_15920) - 3014528..3014869 (+) 342 WP_048237322.1 Na(+)/H(+) antiporter subunit C -
  O0R49_RS15925 (O0R49_15925) - 3014862..3016340 (+) 1479 WP_197197729.1 Na+/H+ antiporter subunit D -
  O0R49_RS15930 (O0R49_15930) - 3016347..3016826 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  O0R49_RS15935 (O0R49_15935) - 3016826..3017107 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  O0R49_RS15940 (O0R49_15940) mnhG 3017091..3017465 (+) 375 WP_144472360.1 monovalent cation/H(+) antiporter subunit G -
  O0R49_RS15945 (O0R49_15945) - 3017571..3017960 (-) 390 WP_048237324.1 hotdog fold thioesterase -
  O0R49_RS15950 (O0R49_15950) comA 3017984..3018625 (-) 642 WP_048237325.1 response regulator transcription factor Regulator
  O0R49_RS15955 (O0R49_15955) comP 3018706..3020997 (-) 2292 WP_269195572.1 ATP-binding protein Regulator
  O0R49_RS15960 (O0R49_15960) comX 3021011..3021184 (-) 174 WP_024425944.1 competence pheromone ComX -
  O0R49_RS15965 (O0R49_15965) - 3021162..3022085 (-) 924 WP_269195573.1 polyprenyl synthetase family protein -
  O0R49_RS15970 (O0R49_15970) degQ 3022237..3022377 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  O0R49_RS15975 (O0R49_15975) - 3022883..3023239 (+) 357 WP_269195574.1 inner spore coat protein -
  O0R49_RS15980 (O0R49_15980) - 3023273..3024499 (-) 1227 WP_048237328.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 88023.30 Da        Isoelectric Point: 6.9282

>NTDB_id=764728 O0R49_RS15955 WP_269195572.1 3018706..3020997(-) (comP) [Bacillus safensis strain PLA 1006]
MQKFYSKLTVILMILSFIYVIYISYINVFNIFVGAVVSVNSDGQLEIEDVVDFTDSYYAGVRKGDIILEVNGNKEPTEEV
RRGYLANVKSLVVDRHGDEIEIENVSLLSQENLFIYIIPIIFYSICLFCIFMILKINKSRKKESAYILALFLLAVAVAYV
SSGGSGKGEYISSFVVIFTMTSVPSLYMHFMYQYLKELGTVIISWRVLLCLYAVPFINIVLEILFKNMVLAAFNLLSFFA
LAFITIIITLRAAKKLKGTEIGNVLSAFALILISSFSPFMLFFIIPYLFHKYFISPYILASFALLIPFFLVYQFMTNKLY
NVDFFLGRIKYYSLLAITPTIVVVVIFDFIQKPSANFYTMKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIREASSLHQVFYHLKYTILEVLVVNKAFVLEVKADGQVEEIDESTEDSKLWKKYVDQFQELLGEVGKIIALDKGF
MMKIGERGGHSFVICCLSNLRTPKLSRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKIMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLVSWNDQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDDGVGFDAS
HLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=764728 O0R49_RS15955 WP_269195572.1 3018706..3020997(-) (comP) [Bacillus safensis strain PLA 1006]
ATGCAAAAATTTTACTCGAAATTAACTGTTATATTAATGATCCTTAGCTTTATTTATGTGATTTATATTTCCTACATCAA
TGTGTTTAATATTTTTGTAGGAGCAGTCGTTTCGGTGAATAGTGACGGCCAACTTGAAATAGAGGATGTTGTTGATTTTA
CAGACAGCTATTATGCTGGTGTTAGGAAAGGCGATATCATCCTTGAAGTGAACGGTAACAAAGAACCAACCGAAGAAGTA
AGACGAGGTTATTTAGCGAATGTCAAGAGTTTAGTTGTTGATAGACATGGTGATGAAATTGAAATAGAGAATGTAAGCTT
ATTGAGTCAAGAAAATCTGTTTATTTATATAATACCTATCATTTTTTATTCGATCTGTCTATTCTGTATATTTATGATTT
TAAAAATCAATAAATCTAGGAAAAAAGAGTCTGCATATATTCTAGCTCTCTTTTTGCTAGCTGTTGCTGTAGCCTATGTA
AGCTCTGGTGGCTCTGGTAAAGGGGAATATATTAGCAGCTTTGTCGTAATTTTTACGATGACTAGTGTACCGTCGTTATA
TATGCACTTTATGTATCAATATTTAAAGGAATTAGGAACGGTAATTATTAGTTGGCGTGTACTTCTTTGTTTGTATGCCG
TCCCTTTTATAAATATTGTATTAGAAATTCTGTTTAAAAATATGGTTTTAGCTGCTTTTAACTTACTTTCATTCTTTGCA
CTTGCATTTATTACGATTATTATCACATTAAGGGCTGCTAAAAAGTTGAAAGGGACTGAAATCGGAAATGTCCTTAGTGC
CTTTGCACTTATTTTGATCTCATCATTCAGTCCATTTATGCTATTTTTTATTATTCCTTATTTATTTCATAAATATTTTA
TTTCACCTTATATCCTAGCATCGTTCGCTTTATTGATTCCGTTTTTCCTAGTCTATCAATTTATGACAAATAAATTATAT
AATGTTGATTTCTTTTTGGGGAGAATCAAATATTATAGTCTTTTAGCCATCACACCTACTATAGTGGTAGTCGTTATATT
TGATTTCATTCAGAAGCCAAGTGCTAACTTTTATACAATGAAATTTACGATTATCACGTATATTCTTATGCTCACTGTCT
TCTATTTTAAAGAAATCATCGACTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCATAATTACCAAGATAGCGTGTTT
AAATTCACGCAGCTCATTCGTGAGGCGTCATCACTTCACCAAGTGTTCTATCATTTAAAATACACCATTTTAGAAGTACT
TGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAGGTAGAAGAGATTGATGAATCGACAGAGGACAGTA
AGCTATGGAAAAAGTATGTAGACCAATTTCAAGAATTATTAGGTGAAGTTGGAAAAATCATTGCGCTTGATAAAGGATTC
ATGATGAAAATTGGTGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTTACGGACACCAAAATTGTCTCG
TGATGAAATTTCTTGGCTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATGTCGTCAAGATCGAAGAATTGA
TGGAGCATCTTGACGATTTGAAACAGCGCGAGGCCAATCCTGCCTGGTTGAAGAAAATCATGTTTGCCATGGAAGAAAAG
CAGCGCTCAGATTTAGCGAGAGATCTTCATGATTCCGTGCTGCAGGACTTGATATCACTAAAAAGGCAGTCAGAGATGTT
TTTAACGAATTTCCAAAACAACCAATGCCCAACCTCCATTGAAAATTCGCTTGTCTCATGGAACGATCAAATGTCTAAAG
TGATTCAGACGACGAGAGAAACGTGTCATGAGCTTCGGCCGCAGCTGCTGTATGATTTAGGTTTAGTAAAGGCGATATCG
AAGCTGACTTCTCAAATTCAAGAGGAAGCACCGTTTCATATAAGGCTGAATACGACACGCTTTGATAAAGAGCTGGACAT
TGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAACTGTTATCCAATGCCCTGAAGCACTCCCAAGCCACTC
AAGTGTTAGTGATGTTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGATGGAGTCGGTTTTGATGCAAGT
CATCTTGATCAGCACACAATGAGCATGGGGCTATCAGGAATTAGGGAACGAGTCAAAGCGTTAAATGGAAAGCTGCAAAT
TCACACAGCACCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.486

100

0.505