Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   O0R52_RS16435 Genome accession   NZ_CP114066
Coordinates   3208331..3210634 (-) Length   767 a.a.
NCBI ID   WP_269107369.1    Uniprot ID   -
Organism   Bacillus halotolerans strain B13     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3203331..3215634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R52_RS16395 (O0R52_16395) - 3203799..3204230 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  O0R52_RS16400 (O0R52_16400) - 3204230..3204571 (+) 342 WP_044158938.1 Na(+)/H(+) antiporter subunit C -
  O0R52_RS16405 (O0R52_16405) - 3204564..3206045 (+) 1482 WP_269107367.1 Na+/H+ antiporter subunit D -
  O0R52_RS16410 (O0R52_16410) - 3206051..3206527 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  O0R52_RS16415 (O0R52_16415) - 3206527..3206811 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  O0R52_RS16420 (O0R52_16420) mnhG 3206795..3207169 (+) 375 WP_059292644.1 monovalent cation/H(+) antiporter subunit G -
  O0R52_RS16425 (O0R52_16425) - 3207208..3207588 (-) 381 WP_044158943.1 hotdog fold thioesterase -
  O0R52_RS16430 (O0R52_16430) comA 3207606..3208250 (-) 645 WP_269107368.1 two-component system response regulator ComA Regulator
  O0R52_RS16435 (O0R52_16435) comP 3208331..3210634 (-) 2304 WP_269107369.1 histidine kinase Regulator
  O0R52_RS16440 (O0R52_16440) comX 3210648..3210821 (-) 174 WP_127696529.1 competence pheromone ComX -
  O0R52_RS16445 (O0R52_16445) - 3210790..3211647 (-) 858 WP_164848141.1 polyprenyl synthetase family protein -
  O0R52_RS16450 (O0R52_16450) degQ 3211855..3211995 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  O0R52_RS16455 (O0R52_16455) - 3212456..3212824 (+) 369 WP_044158947.1 hypothetical protein -
  O0R52_RS16460 (O0R52_16460) - 3212800..3214029 (-) 1230 WP_044158949.1 EAL and HDOD domain-containing protein -
  O0R52_RS16465 (O0R52_16465) - 3214165..3215634 (-) 1470 WP_024122686.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 767 a.a.        Molecular weight: 88729.18 Da        Isoelectric Point: 7.6365

>NTDB_id=764411 O0R52_RS16435 WP_269107369.1 3208331..3210634(-) (comP) [Bacillus halotolerans strain B13]
MKLSKNTYSVILILLSMSYIFYLTYINVNNLFVGATANVNNKGQIEITRVSDYTMAYYAGVKKGDIVIKINQNQNVEPKD
LKQNTLKNVRSMTVIRSGEIVELKNLSLISEDNLFVYLIPVIFFFVCLSCIILILKINKEKNLVSAFILIIFLLTTGMAY
VSAGGSSKGDLISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKIFVVLYTVPVINVILELFRNCFDRGVLGKVNLV
SISLLYLIALFFIAVGLIKHKKTEQANILKTFLLINIFAFSPFVFLFVAPYIIFDDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQEPNSEFYTFKLTLLTYIIMLAVFYSKELLDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMISKVCVLEVEGDLNVRYFFNDNEKKLWEPYSHQLAETTREIGKIVQV
DKGFFMKIGERGSKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLLFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLAEFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLG
LVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGVG
FDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=764411 O0R52_RS16435 WP_269107369.1 3208331..3210634(-) (comP) [Bacillus halotolerans strain B13]
ATGAAATTATCTAAAAATACGTATTCCGTTATATTAATTTTACTCAGCATGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATCTATTTGTAGGAGCCACCGCAAATGTTAATAACAAAGGTCAAATAGAAATTACCAGAGTGTCAGATTACA
CAATGGCTTATTATGCAGGTGTCAAAAAAGGCGACATTGTAATTAAAATTAATCAGAATCAGAATGTTGAACCAAAAGAT
TTAAAACAGAATACATTAAAAAACGTTAGATCTATGACAGTTATAAGATCTGGTGAAATAGTTGAACTCAAAAACTTAAG
TTTAATAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTCTTCTTCGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAAAAAAATTTAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATGGCATAT
GTAAGTGCGGGAGGTTCGTCAAAAGGAGATCTAATAAGTCGATATGTAAATGTTATAACTTTAATATCCGTACCTGTAAA
TTATCTCTTGTTTATCTACCAATATATTAAGGAATTTGGATACAAGATTTTTAATGGGAAAATTTTTGTTGTTTTATATA
CAGTCCCTGTTATTAATGTAATATTAGAGTTGTTTAGAAATTGCTTTGATAGAGGAGTTTTGGGAAAGGTTAATTTAGTT
TCAATATCTCTTCTTTATTTAATAGCTTTATTTTTCATTGCTGTAGGCTTAATAAAGCACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTGATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTTTGTGGCACCTTACATTATTT
TTGATGACTATTATGTTTCTTCTTTTTTGGTTGCGCCTTTTCTTTTATTAATTCCGTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATCATCGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTCTGCT
TATTATTACAATTTATGACCTTGTACAAGAGCCAAATTCAGAATTTTATACGTTTAAACTAACTTTGCTTACGTATATTA
TTATGCTGGCTGTGTTTTATTCCAAAGAGCTCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGTATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCGTTAAAACAAGTATTCACTGAACTTGAATCTAC
TCTTCTTGAAGTTTTGATGATTAGTAAAGTATGTGTTTTAGAAGTCGAAGGAGACTTAAATGTAAGATACTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCCGAAACGACCAGAGAAATCGGCAAAATAGTTCAGGTG
GATAAAGGTTTTTTTATGAAAATAGGGGAACGGGGCAGTAAATCATACATTGTTTTATGTTTATCATTCATGAATACTCC
CAAGCTGACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACAAGCATTACGATGGAGAACGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGCTGTTTACC
ATCGAAGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCAGTTCTTCAGGATTTGATTTCATTAAAACGGCA
GTGTGAGCTGTTTTTGGCTGAGTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTACAGATGA
ATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTGGGA
CTGGTGAAGGCGCTGTCCAAGCTGGTAGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAGATT
TACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAATGCAGTGAAACATT
CTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGATGATGGTGTCGGA
TTTGATCTGGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGATGG
ACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

58.431

99.739

0.583