Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   OIY87_RS08710 Genome accession   NZ_CP113954
Coordinates   1741356..1742357 (-) Length   333 a.a.
NCBI ID   WP_009854678.1    Uniprot ID   A0A139R5I1
Organism   Streptococcus gallolyticus strain XH2168     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1736356..1747357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIY87_RS08695 (OIY87_10010) thrS 1736630..1738576 (-) 1947 WP_249550875.1 threonine--tRNA ligase -
  OIY87_RS08700 (OIY87_10015) - 1738926..1740260 (-) 1335 WP_009854676.1 glycosyltransferase family 4 protein -
  OIY87_RS08705 (OIY87_10020) - 1740262..1741260 (-) 999 WP_269724895.1 glycosyltransferase family 4 protein -
  OIY87_RS08710 (OIY87_10025) ccpA 1741356..1742357 (-) 1002 WP_009854678.1 catabolite control protein A Regulator
  OIY87_RS08715 (OIY87_10030) - 1742685..1743770 (+) 1086 WP_269724896.1 M24 family metallopeptidase -
  OIY87_RS08720 (OIY87_10035) - 1743804..1744130 (-) 327 WP_009854680.1 DMT family transporter -
  OIY87_RS08725 (OIY87_10040) - 1744379..1744876 (+) 498 WP_039695064.1 NAD(+) diphosphatase -
  OIY87_RS08730 (OIY87_10045) - 1744928..1746694 (-) 1767 WP_269724897.1 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36497.48 Da        Isoelectric Point: 5.0313

>NTDB_id=763838 OIY87_RS08710 WP_009854678.1 1741356..1742357(-) (ccpA) [Streptococcus gallolyticus strain XH2168]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKDGFELAQRVINSG
ATAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLTTRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=763838 OIY87_RS08710 WP_009854678.1 1741356..1742357(-) (ccpA) [Streptococcus gallolyticus strain XH2168]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAAAAAGTCCTTGAAGTTATTGATCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATCCCTAATATTGCTAACAGCTATTTCTCA
ATTCTTGCTAAAGGGATTGATGATATTGCCGCTATGTACAAGTACAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAAGTTAACGTTGTTAACACCTTGTTTGCTAAACAAGTTGACGGTATTATCTTCATGGGACATCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGACTACAAAGCAGCCGTTGCTGATGTTGTTGATATTTTGGCTAAAAACAATAAAGAAATCGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAATGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCAT
TCAAAGAAGGTCTTGTCTTTGAAGCTAATTACAACTATAAAGATGGATTTGAACTTGCACAACGTGTGATTAATTCTGGC
GCAACAGCAGCCTTTGTTGCCGAAGACGAATTGGCAGCAGGATTGTTGAATGGCTTGTTCGAAGCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATCATCACAAGCAATGATTCACCAATCACATCATACACACGTCCAAACCTTAGCTCAATCAGCCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAGGAACTCGAAGAAAAAGAAATT
CTTCTTAACCACGGTCTTACAACACGTGGCACAACACGTTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A139R5I1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.48

100

0.805
  ccpA Streptococcus pneumoniae D39

78.378

100

0.784
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556