Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QLQ05_RS03550 Genome accession   NZ_CP125762
Coordinates   682647..683360 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain KRS015     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 677647..688360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS03515 yvcI 677893..678369 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  QLQ05_RS03520 rapZ 678394..679281 (+) 888 WP_003243903.1 RNase adapter RapZ -
  QLQ05_RS03525 mgfK 679283..680236 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  QLQ05_RS03530 whiA 680259..681209 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  QLQ05_RS03535 crh 681233..681490 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  QLQ05_RS03540 yvcN 681491..682255 (+) 765 WP_009968228.1 arylamine N-acetyltransferase -
  QLQ05_RS03545 yvzJ 682291..682500 (-) 210 WP_003243327.1 lipoprotein -
  QLQ05_RS03550 braR 682647..683360 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  QLQ05_RS03555 psdS 683354..684424 (+) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  QLQ05_RS03560 psdA 684507..685286 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  QLQ05_RS03565 psdB 685261..687201 (+) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  QLQ05_RS03570 yvcT 687239..688216 (-) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=763838 QLQ05_RS03550 WP_003244535.1 682647..683360(+) (braR) [Bacillus subtilis strain KRS015]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=763838 QLQ05_RS03550 WP_003244535.1 682647..683360(+) (braR) [Bacillus subtilis strain KRS015]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43