Detailed information
Bioinformatically predicted
Overview
| Name | comR | Type | Regulator |
| Locus tag | OIY87_RS00770 | Genome accession | NZ_CP113954 |
| Coordinates | 114660..115562 (+) | Length | 300 a.a. |
| NCBI ID | WP_269725075.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus strain XH2168 | ||
| Function | activate transcription of comX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 109660..120562
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OIY87_RS00730 (OIY87_02025) | comYF | 109755..110222 (+) | 468 | WP_012961330.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| OIY87_RS00735 (OIY87_02030) | comYG | 110194..110526 (+) | 333 | WP_420067733.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| OIY87_RS00740 (OIY87_02035) | comYH | 110581..111537 (+) | 957 | WP_009853236.1 | class I SAM-dependent methyltransferase | Machinery gene |
| OIY87_RS00745 (OIY87_02040) | - | 111590..112789 (+) | 1200 | WP_061458770.1 | acetate kinase | - |
| OIY87_RS00750 (OIY87_02045) | - | 112951..113151 (+) | 201 | WP_269725072.1 | helix-turn-helix transcriptional regulator | - |
| OIY87_RS00755 (OIY87_02050) | - | 113161..113391 (+) | 231 | WP_269725073.1 | chaperone CbpA | - |
| OIY87_RS00760 (OIY87_02055) | - | 113382..113834 (+) | 453 | WP_061458772.1 | hypothetical protein | - |
| OIY87_RS00765 (OIY87_02060) | - | 113846..114481 (+) | 636 | WP_269725074.1 | CPBP family intramembrane glutamic endopeptidase | - |
| OIY87_RS00770 (OIY87_02065) | comR | 114660..115562 (+) | 903 | WP_269725075.1 | helix-turn-helix domain-containing protein | Regulator |
| OIY87_RS00775 (OIY87_02070) | purD | 116019..117281 (+) | 1263 | WP_269725076.1 | phosphoribosylamine--glycine ligase | - |
| OIY87_RS00780 (OIY87_02075) | - | 117271..117720 (+) | 450 | WP_269725077.1 | DUF523 domain-containing protein | - |
| OIY87_RS00785 (OIY87_02080) | purE | 117720..118208 (+) | 489 | WP_061458775.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| OIY87_RS00790 (OIY87_02085) | purK | 118195..119286 (+) | 1092 | WP_268736747.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| OIY87_RS00795 (OIY87_02090) | - | 119306..119530 (+) | 225 | WP_061458915.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 35301.29 Da Isoelectric Point: 4.8345
>NTDB_id=763803 OIY87_RS00770 WP_269725075.1 114660..115562(+) (comR) [Streptococcus gallolyticus strain XH2168]
MEKFGIKVRALREEKGISREEFCGDETELSVRQLARIESNQSIPSLSKAQFIANQLGVTLGTMTDGDSLELPRRYEELKY
LLIRTPTYGDKVRLERKGEYFDEISEKFYDIIPEEERLIIDCLQAKLDVHFSDDVNFGEGILNDYFDQVRRKKNFQINDL
ILIDLYFICLESAKTTEGIYSITFYDKLMKRLINQKRISPETDLILNNVLLNNIDLAFKYGRENYVERVIEISNSIMTEI
HDFQRRPILSLVEWKYYLKFKHDFVAAEQSFTNATLFARLVGDTYLENKLKEEWKLDTTT
MEKFGIKVRALREEKGISREEFCGDETELSVRQLARIESNQSIPSLSKAQFIANQLGVTLGTMTDGDSLELPRRYEELKY
LLIRTPTYGDKVRLERKGEYFDEISEKFYDIIPEEERLIIDCLQAKLDVHFSDDVNFGEGILNDYFDQVRRKKNFQINDL
ILIDLYFICLESAKTTEGIYSITFYDKLMKRLINQKRISPETDLILNNVLLNNIDLAFKYGRENYVERVIEISNSIMTEI
HDFQRRPILSLVEWKYYLKFKHDFVAAEQSFTNATLFARLVGDTYLENKLKEEWKLDTTT
Nucleotide
Download Length: 903 bp
>NTDB_id=763803 OIY87_RS00770 WP_269725075.1 114660..115562(+) (comR) [Streptococcus gallolyticus strain XH2168]
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGGAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTGTGAGACAGCTAGCTAGAATTGAGTCCAATCAGTCAATTCCTAGCCTAAGTAAAGCCCAATTCATTGCCA
ATCAACTTGGTGTTACCTTGGGTACAATGACGGATGGTGATAGCTTGGAATTGCCTAGACGGTATGAAGAGTTAAAGTAT
CTTTTGATTCGTACGCCGACATATGGGGATAAAGTTAGATTGGAGCGTAAGGGAGAATATTTTGATGAAATTTCAGAGAA
ATTTTATGATATTATTCCCGAAGAAGAAAGATTAATCATTGATTGCTTACAAGCTAAACTGGATGTCCATTTTAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTATTTTGACCAAGTTAGACGAAAGAAGAACTTTCAAATTAATGATTTG
ATTTTGATTGACCTCTATTTTATTTGTTTGGAATCGGCTAAGACAACTGAAGGAATTTATAGTATAACTTTTTACGATAA
ACTGATGAAGAGACTAATCAATCAAAAACGTATTTCGCCAGAAACCGATTTGATTTTAAATAATGTGTTGTTAAATAATA
TTGATTTAGCATTTAAATATGGACGAGAAAATTATGTTGAACGTGTTATTGAAATCAGTAATAGTATTATGACAGAAATT
CATGACTTCCAGCGTCGCCCAATTTTAAGTCTGGTAGAGTGGAAGTATTATTTAAAGTTTAAACATGATTTTGTTGCAGC
AGAACAGTCTTTTACAAATGCAACATTATTTGCAAGATTAGTTGGCGATACCTATTTAGAAAATAAGTTGAAAGAAGAAT
GGAAATTGGATACAACAACATGA
TTGGAAAAGTTTGGGATTAAAGTACGTGCATTAAGAGAGGAAAAGGGAATTTCACGTGAGGAATTCTGTGGTGATGAAAC
AGAATTGTCTGTGAGACAGCTAGCTAGAATTGAGTCCAATCAGTCAATTCCTAGCCTAAGTAAAGCCCAATTCATTGCCA
ATCAACTTGGTGTTACCTTGGGTACAATGACGGATGGTGATAGCTTGGAATTGCCTAGACGGTATGAAGAGTTAAAGTAT
CTTTTGATTCGTACGCCGACATATGGGGATAAAGTTAGATTGGAGCGTAAGGGAGAATATTTTGATGAAATTTCAGAGAA
ATTTTATGATATTATTCCCGAAGAAGAAAGATTAATCATTGATTGCTTACAAGCTAAACTGGATGTCCATTTTAGTGATG
ATGTTAATTTTGGTGAAGGAATTTTAAATGATTATTTTGACCAAGTTAGACGAAAGAAGAACTTTCAAATTAATGATTTG
ATTTTGATTGACCTCTATTTTATTTGTTTGGAATCGGCTAAGACAACTGAAGGAATTTATAGTATAACTTTTTACGATAA
ACTGATGAAGAGACTAATCAATCAAAAACGTATTTCGCCAGAAACCGATTTGATTTTAAATAATGTGTTGTTAAATAATA
TTGATTTAGCATTTAAATATGGACGAGAAAATTATGTTGAACGTGTTATTGAAATCAGTAATAGTATTATGACAGAAATT
CATGACTTCCAGCGTCGCCCAATTTTAAGTCTGGTAGAGTGGAAGTATTATTTAAAGTTTAAACATGATTTTGTTGCAGC
AGAACAGTCTTTTACAAATGCAACATTATTTGCAAGATTAGTTGGCGATACCTATTTAGAAAATAAGTTGAAAGAAGAAT
GGAAATTGGATACAACAACATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR | Streptococcus infantarius subsp. infantarius ATCC BAA-102 |
83.624 |
95.667 |
0.8 |
| comR | Streptococcus mutans UA159 |
52.508 |
99.667 |
0.523 |
| comR | Streptococcus pyogenes MGAS8232 |
50.993 |
100 |
0.513 |
| comR | Streptococcus pyogenes MGAS315 |
45.638 |
99.333 |
0.453 |
| comR | Streptococcus suis P1/7 |
37.874 |
100 |
0.38 |
| comR | Streptococcus suis 05ZYH33 |
37.874 |
100 |
0.38 |
| comR | Streptococcus suis D9 |
36.667 |
100 |
0.367 |