Detailed information    

experimental Experimentally validated

Overview

Name   ctsR   Type   Machinery gene
Locus tag   CJJ81176_RS07070 Genome accession   NC_008787
Coordinates   1387377..1387688 (-) Length   103 a.a.
NCBI ID   WP_002855438.1    Uniprot ID   A0AA44HLF8
Organism   Campylobacter jejuni subsp. jejuni 81-176     
Function   type II secretion system/type IV pilin; DNA uptake   
DNA binding and uptake

Function

Each mutant takes up DNA at levels no greater than the background level, which is ca. 10% of the wild-type level.


Genomic Context

Location: 1382377..1392688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJJ81176_RS07050 (CJJ81176_1464) ctsE 1383246..1384805 (-) 1560 WP_011812800.1 GspE/PulE family protein Machinery gene
  CJJ81176_RS07055 (CJJ81176_1465) ctsX 1384795..1385382 (-) 588 WP_002851370.1 membrane protein Machinery gene
  CJJ81176_RS07060 (CJJ81176_1466) ctsP 1385386..1385994 (-) 609 WP_011812801.1 ATP-binding protein Machinery gene
  CJJ81176_RS07065 (CJJ81176_1467) ctsD 1385987..1387399 (-) 1413 WP_002856543.1 pilus (MSHA type) biogenesis protein MshL Machinery gene
  CJJ81176_RS07070 (CJJ81176_1468) ctsR 1387377..1387688 (-) 312 WP_002855438.1 hypothetical protein Machinery gene
  CJJ81176_RS07075 (CJJ81176_1469) nifJ 1387712..1391272 (-) 3561 WP_002869199.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase -
  CJJ81176_RS07080 (CJJ81176_1470) - 1391365..1392006 (-) 642 WP_002869201.1 HAD family hydrolase -

Sequence

Protein


Download         Length: 103 a.a.        Molecular weight: 12475.38 Da        Isoelectric Point: 5.8722

>NTDB_id=1231 CJJ81176_RS07070 WP_002855438.1 1387377..1387688(-) (ctsR) [Campylobacter jejuni subsp. jejuni 81-176]
MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRHIKITAIMLDKVKIYDRWYKKGDMIDDAIIYEINTKE
IKFQYDNLEIAIQINKNDKININ

Nucleotide


Download         Length: 312 bp        

>NTDB_id=1231 CJJ81176_RS07070 WP_002855438.1 1387377..1387688(-) (ctsR) [Campylobacter jejuni subsp. jejuni 81-176]
TTGTGTTTTAGCACTTTGTTTGCACAAGATAATTTTGAAGAGTATTTTAAACTTATAGATAAAGAAAATCGCATAAATTT
TAATACTCTTCAAAACCCATTTGTGAATCCTACTTTTGAAAAATTAAGACATATTAAAATTACTGCAATTATGCTTGATA
AAGTAAAAATTTATGATCGATGGTATAAAAAAGGTGATATGATTGATGATGCTATAATATATGAAATAAATACTAAAGAG
ATTAAATTCCAATATGATAATTTAGAAATTGCAATCCAAATAAATAAAAATGATAAGATTAATATTAATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value

References

[1] Rebecca S Wiesner et al. (2003) Natural transformation of Campylobacter jejuni requires components of a type II secretion system. Journal of Bacteriology 185(18):5408-18. [PMID: 12949093]