Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   OZX61_RS04575 Genome accession   NZ_CP113932
Coordinates   958016..958714 (-) Length   232 a.a.
NCBI ID   WP_195771870.1    Uniprot ID   -
Organism   Acinetobacter sp. ESL0695     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 953016..963714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZX61_RS04560 (OZX61_04560) - 954702..955361 (-) 660 WP_277095443.1 hypothetical protein -
  OZX61_RS04565 (OZX61_04565) - 956072..956860 (+) 789 WP_277095444.1 M48 family metallopeptidase -
  OZX61_RS04570 (OZX61_04570) - 956899..957948 (-) 1050 WP_277095445.1 NADP(H)-dependent aldo-keto reductase -
  OZX61_RS04575 (OZX61_04575) crp 958016..958714 (-) 699 WP_195771870.1 cAMP-activated global transcriptional regulator CRP Regulator
  OZX61_RS04580 (OZX61_04580) - 958858..959283 (+) 426 WP_195771871.1 OsmC family protein -
  OZX61_RS04585 (OZX61_04585) - 959303..960103 (-) 801 WP_277095446.1 peptidoglycan DD-metalloendopeptidase family protein -
  OZX61_RS04590 (OZX61_04590) - 960238..962427 (-) 2190 WP_277095447.1 TonB-dependent siderophore receptor -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 26329.11 Da        Isoelectric Point: 5.7745

>NTDB_id=763616 OZX61_RS04575 WP_195771870.1 958016..958714(-) (crp) [Acinetobacter sp. ESL0695]
MVANFRPFANDALSPNQLPESIKALLKVAYINRYAKRTTIIEAGKESKSLYLVLKGSVSVVLREDDEREIVIAYLNAGDF
FGEMGLFDNESHRTAEVRTREVSEIAEISYEHFTELTKEYPDLNYAIFEQLTRRLKNTTRKMTDLAFIDVTGRIARCLID
LAHQPAAMLLPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETEGKAILIYDSALESSSEPQHKES

Nucleotide


Download         Length: 699 bp        

>NTDB_id=763616 OZX61_RS04575 WP_195771870.1 958016..958714(-) (crp) [Acinetobacter sp. ESL0695]
ATGGTAGCTAATTTTCGTCCATTTGCAAACGATGCACTCTCTCCCAACCAGCTCCCTGAATCTATCAAGGCCTTACTAAA
AGTCGCTTATATTAACCGCTATGCAAAACGCACAACGATTATTGAAGCAGGTAAAGAGTCTAAATCGCTTTACCTTGTTT
TAAAAGGTTCTGTGTCAGTTGTTCTTCGTGAAGATGATGAACGTGAAATCGTCATTGCATACTTAAATGCAGGTGACTTC
TTTGGTGAAATGGGTCTATTTGACAATGAGTCTCATAGAACAGCTGAGGTTCGTACACGTGAAGTATCTGAGATTGCTGA
AATCTCATATGAACACTTTACAGAGTTAACGAAAGAATACCCTGACCTTAATTATGCCATTTTTGAGCAACTCACTCGTA
GACTCAAAAATACAACACGTAAAATGACTGATCTAGCATTTATTGATGTTACTGGTCGTATTGCACGTTGTCTTATCGAT
CTTGCCCATCAGCCAGCAGCAATGCTATTGCCAAATGGTCGCCAAATTCGTATTACACGTCAAGAAATCGGTCGTATTGT
CGGCTGTTCACGTGAAATGGTTGGACGTGTTCTTAAAACCTTAGAAGAGCAAGGTATGATTGAAACAGAAGGCAAAGCTA
TTCTAATTTACGACAGTGCTTTAGAAAGCTCAAGCGAGCCACAACACAAAGAAAGTTAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-119)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

78.125

96.552

0.754
  crp Vibrio cholerae strain A1552

47.115

89.655

0.422
  crp Haemophilus influenzae Rd KW20

49.231

84.052

0.414