Detailed information NTG0763364

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OXH74_RS19610
• Genome accession: NZ_CP113889
• Coordinates: 4192043..4194274 (+)
• Length: 743 a.a.
• NCBI ID: WP_375738452.1
• Uniprot ID: -
• Organism: Pseudomonas boanensis strain L337
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4187043..4199274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OXH74_RS19580 (OXH74_19535)	-	4187137..4187430 (-)	294	WP_375738446.1	phosphodiesterase	-
OXH74_RS19585 (OXH74_19540)	-	4187440..4188024 (-)	585	WP_375741651.1	PilZ domain-containing protein	-
OXH74_RS19590 (OXH74_19545)	-	4188122..4189372 (+)	1251	WP_375738447.1	lipoprotein-releasing ABC transporter permease subunit	-
OXH74_RS19595 (OXH74_19550)	lolD	4189365..4190048 (+)	684	WP_375738448.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
OXH74_RS19600 (OXH74_19555)	-	4190050..4191294 (+)	1245	WP_375738449.1	lipoprotein-releasing ABC transporter permease subunit	-
OXH74_RS19605 (OXH74_19560)	-	4191355..4191879 (-)	525	WP_375738451.1	DUF2062 domain-containing protein	-
OXH74_RS19610 (OXH74_19565)	comA	4192043..4194274 (+)	2232	WP_375738452.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OXH74_RS19615 (OXH74_19570)	exbB	4194347..4194982 (+)	636	WP_215370278.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
OXH74_RS19620 (OXH74_19575)	-	4194979..4195422 (+)	444	WP_375738453.1	ExbD/TolR family protein	-
OXH74_RS19625 (OXH74_19580)	lpxK	4195422..4196426 (+)	1005	WP_375738454.1	tetraacyldisaccharide 4'-kinase	-
OXH74_RS19630 (OXH74_19585)	-	4196467..4196652 (+)	186	WP_215370287.1	Trm112 family protein	-
OXH74_RS19635 (OXH74_19590)	kdsB	4196649..4197413 (+)	765	WP_375738455.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OXH74_RS19640 (OXH74_19595)	-	4197413..4197874 (+)	462	WP_375738456.1	low molecular weight protein-tyrosine-phosphatase	-
OXH74_RS19645 (OXH74_19600)	murB	4197871..4198890 (+)	1020	WP_375738457.1	UDP-N-acetylmuramate dehydrogenase	-
OXH74_RS19650 (OXH74_19605)	-	4198990..4199271 (-)	282	WP_375738458.1	pyrimidine/purine nucleoside phosphorylase	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 80489.35 Da
• Isoelectric Point: 9.5961

>NTDB_id=763364 OXH74_RS19610 WP_375738452.1 4192043..4194274(+) (comA) [Pseudomonas boanensis strain L337]
MSLHSGLAAFAAGLLLLRALPMLPPVWWLWPQLLLGVLLLAGRGWRLGFFLVGLSWASLAAQWALDDRLEPGLDGQTRWL
EGRVVGLPQRNDGVARFELTDLTSRRARLPGRLRLAWHGGPEIHAGDRWRLAVTLKQPRGLVNPATFDYEAWLLGRHIGG
TGSVKAGERLEPAEGPAAWRDQLRQRLLQVDAHGRQGGLAALVMGDGSGLDSKDWRILQDTGTTHLMVISGQHITLLASV
LYGFVALLARFGFWPGRVPWLPAACAAAFAGALGYGFLAGFDVPVRRACVMIAVVLLWRLRFRHLGIVTPLLLALCLVLL
TDPLVVLQPGFWLSFGAVALLLLVFGGRLGAWIWWQAWWRAQWTMALGLAPLMVALALPISISGPLANLVAVPWVSLIVL
PLGLLGTLSLPVPVIGEGLLWLAGGALDWLFILLAWIAGQWPAWIPEAVSLWGWALGALGVILLLLPAGIPLRALGAMLL
LPALFPPSPRPLVGHADIWLLDVGQGLSVLVRTREHALLYDAGPRRGDFDLGERIVVPVLRGLGVDRLDLMLLSHADSDH
AGGASAVQRGLAVEGVVSGEPDRLPAELAASGCKAGDEWSWDGVRFATWQWPGAQDSNDKSCVLSVEARGERMLLSGDLG
ARGEAAWVAGTQYLRARWLVAGHHGSRTSSSPILLRAVAPERVLISRGAHNPYGHPHPLVVSRIMGLPAAILDTAERGAL
LIRLGHYVEAEAYRDKPVFWREK

Nucleotide

• Length: 2232 bp

>NTDB_id=763364 OXH74_RS19610 WP_375738452.1 4192043..4194274(+) (comA) [Pseudomonas boanensis strain L337]
ATGTCGTTGCATTCAGGGCTGGCTGCGTTTGCAGCAGGCCTCCTCCTGTTGCGGGCGCTGCCAATGCTCCCACCTGTCTG
GTGGTTGTGGCCGCAACTCCTGCTCGGTGTGCTGCTGCTAGCAGGAAGAGGCTGGCGACTGGGTTTTTTTCTTGTCGGAT
TGTCCTGGGCGAGCCTGGCAGCCCAATGGGCGCTCGACGACCGACTGGAGCCCGGGCTTGATGGGCAGACGCGCTGGCTT
GAAGGACGGGTGGTTGGTCTGCCTCAGCGCAATGATGGTGTGGCCCGATTCGAGCTGACGGATCTGACCTCGCGTCGCGC
TCGCCTACCTGGCCGTTTGCGGTTGGCGTGGCACGGTGGGCCGGAAATCCACGCCGGCGACCGCTGGCGCCTCGCCGTTA
CCCTCAAGCAGCCTAGGGGGTTGGTCAATCCGGCGACCTTCGATTACGAAGCCTGGCTTCTGGGTCGGCATATCGGCGGT
ACGGGCTCTGTGAAAGCCGGGGAGCGCCTCGAGCCAGCGGAAGGACCTGCCGCTTGGCGCGACCAGTTGCGTCAGCGTCT
TCTACAGGTCGACGCCCATGGGCGCCAGGGTGGGCTTGCCGCGCTGGTTATGGGGGACGGTTCGGGGCTGGATTCGAAGG
ACTGGCGCATCTTGCAGGATACCGGCACGACCCACCTGATGGTGATCTCTGGGCAGCACATTACACTGCTGGCAAGCGTG
CTTTATGGGTTCGTCGCGTTGCTCGCGCGGTTTGGGTTTTGGCCTGGTCGCGTGCCGTGGCTACCGGCGGCCTGCGCTGC
TGCGTTCGCAGGAGCATTGGGATACGGGTTTCTTGCAGGGTTCGATGTGCCCGTCCGACGGGCTTGCGTGATGATCGCGG
TGGTATTGCTGTGGCGCTTGCGCTTTCGTCACCTGGGCATCGTCACGCCGCTGTTGTTGGCGTTGTGCCTGGTGCTGCTG
ACTGACCCCCTGGTGGTCCTGCAGCCAGGATTCTGGCTGTCGTTTGGTGCCGTTGCACTGCTCCTGTTGGTATTCGGTGG
GCGTCTAGGCGCATGGATATGGTGGCAGGCGTGGTGGCGCGCGCAGTGGACCATGGCGCTGGGGTTGGCACCCCTGATGG
TGGCGCTGGCCCTTCCGATCAGTATCAGCGGGCCTCTGGCGAACCTGGTGGCTGTGCCGTGGGTCAGTCTTATTGTGCTT
CCGCTGGGCTTGCTCGGGACCTTGTCGTTGCCTGTGCCCGTCATTGGCGAGGGTCTTTTGTGGTTGGCGGGCGGAGCTTT
GGACTGGTTGTTCATTCTTCTGGCCTGGATTGCCGGGCAATGGCCTGCTTGGATACCTGAGGCGGTATCGCTGTGGGGAT
GGGCGTTGGGCGCCTTGGGGGTGATTCTCCTGCTCCTGCCTGCCGGTATTCCCCTGCGGGCTCTCGGTGCGATGCTCTTG
CTGCCAGCTCTGTTCCCCCCATCTCCACGTCCGTTGGTGGGGCATGCGGACATCTGGCTACTCGATGTGGGTCAGGGGCT
CTCGGTCCTCGTGCGGACTCGCGAACATGCGCTGCTCTACGATGCAGGACCACGAAGGGGAGACTTCGATCTTGGTGAGC
GAATCGTCGTGCCGGTACTGAGAGGGTTGGGCGTGGATCGTCTCGACCTGATGCTGCTAAGCCACGCGGACTCGGACCAT
GCCGGCGGCGCCTCGGCTGTGCAGCGAGGGCTGGCTGTCGAAGGGGTGGTCAGCGGCGAACCTGATCGCCTGCCAGCAGA
GCTCGCGGCGAGTGGCTGCAAGGCGGGTGACGAATGGAGTTGGGATGGGGTCAGGTTCGCAACCTGGCAATGGCCTGGCG
CCCAGGACAGTAACGACAAGTCCTGCGTACTCAGCGTCGAGGCCAGGGGCGAGCGCATGCTCTTGAGCGGTGATCTCGGT
GCGCGTGGTGAGGCTGCCTGGGTCGCCGGTACCCAATACCTGCGAGCGCGTTGGCTGGTGGCTGGCCATCACGGTAGTCG
GACATCATCCTCACCAATACTTCTGCGGGCCGTAGCCCCGGAGCGCGTGCTGATTTCACGTGGGGCGCATAATCCTTATG
GGCATCCGCACCCGCTGGTGGTTTCACGCATCATGGGTCTGCCGGCCGCTATCCTGGATACGGCAGAGCGTGGGGCACTT
CTTATCCGGCTTGGCCACTATGTCGAGGCAGAAGCCTATCGCGACAAGCCCGTGTTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (24-169)

• Competence protein (Competence) (202-466)

• Metallo-beta-lactamase superfamily (Lactamase_B) (502-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.917	96.904	0.61
comA	Ralstonia pseudosolanacearum GMI1000	34.662	100	0.386