Detailed information NTG0763343

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OXH74_RS04040
• Genome accession: NZ_CP113889
• Coordinates: 866374..867711 (+)
• Length: 445 a.a.
• NCBI ID: WP_375740169.1
• Uniprot ID: -
• Organism: Pseudomonas boanensis strain L337
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 861374..872711

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OXH74_RS04020 (OXH74_04020)	-	861779..862606 (+)	828	WP_375740166.1	inositol monophosphatase family protein	-
OXH74_RS04025 (OXH74_04025)	-	862736..864367 (-)	1632	WP_375740167.1	NAD+ synthase	-
OXH74_RS04030 (OXH74_04030)	-	864553..864789 (+)	237	WP_215373029.1	PP0621 family protein	-
OXH74_RS04035 (OXH74_04035)	pilS	864779..866371 (+)	1593	WP_375740168.1	PAS domain-containing sensor histidine kinase	Regulator
OXH74_RS04040 (OXH74_04040)	pilR	866374..867711 (+)	1338	WP_375740169.1	sigma-54-dependent transcriptional regulator	Regulator
OXH74_RS04045 (OXH74_04045)	thiO	868930..870021 (-)	1092	WP_375740170.1	glycine oxidase ThiO	-
OXH74_RS04050 (OXH74_04050)	-	870221..870757 (-)	537	WP_375740171.1	GspH/FimT family pseudopilin	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49900.23 Da
• Isoelectric Point: 5.6620

>NTDB_id=763343 OXH74_RS04040 WP_375740169.1 866374..867711(+) (pilR) [Pseudomonas boanensis strain L337]
MTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNLKEAREWLAREPFDLCLTDMRLPDGTGLELVQYIQQRHPLVPVAM
ITAYGSLDTAVNALKAGAFDFVTKPVDLGRLRELVNTALRLSNPEASEAPVDSRLLGDSPPMKSLRNQIQKLARSQAPVY
ISGESGSGKELVARLIHEQGPRAERPFVPVNCGAIPSELMESEFFGHKKGSFTGALEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRTVGGQQEVVVDVRILSATHKDLAAEVAAGRFRQDLYYRLNVIELGVPPLRERREDIPLLTETM
LKRLAQQSGLPAARLTTEALDKLKCYRFPGNVRELENMLERAYTLCEDNEIQARDLRLSEASSSAESGEANLAQIDNLED
YLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=763343 OXH74_RS04040 WP_375740169.1 866374..867711(+) (pilR) [Pseudomonas boanensis strain L337]
ATGACCCGACAGAGAGCCCTGATCGTCGATGACGAGCCCGATATCCGCGAATTGCTGGAGATCACCCTCGGGCGGATGAA
GCTCGACACCCGCAGCGCACGCAATCTCAAGGAAGCCCGCGAATGGCTGGCCCGCGAGCCCTTCGACCTGTGCCTGACCG
ACATGCGCCTGCCCGATGGCACTGGCCTTGAGCTAGTACAGTACATCCAGCAGCGCCACCCGCTGGTCCCGGTAGCGATG
ATCACTGCCTACGGTAGCCTCGACACTGCCGTGAACGCCCTGAAGGCCGGCGCCTTCGACTTCGTCACCAAGCCCGTCGA
CCTCGGCCGCTTGCGCGAACTGGTCAATACGGCCCTGCGTCTCAGCAATCCGGAAGCCAGCGAAGCGCCGGTGGATAGTC
GCTTGCTGGGCGACTCGCCGCCGATGAAGTCCCTGCGCAATCAGATCCAGAAACTTGCCCGCAGCCAGGCGCCGGTCTAC
ATCAGCGGCGAATCCGGCAGCGGCAAGGAGCTGGTGGCTCGCCTGATCCACGAGCAAGGGCCGCGCGCAGAACGCCCCTT
CGTTCCGGTGAACTGCGGCGCCATTCCCTCGGAGCTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCAGCTTCACCG
GCGCGCTCGAAGACAAGCAGGGCCTGTTCCAGGCGGCCAATGGCGGCACCTTGTTCCTCGACGAAGTGGCGGACCTGCCG
TTGCCAATGCAGGTGAAACTGCTACGCGCCATTCAGGAAAAGGCCGTAAGGACCGTTGGTGGTCAGCAGGAAGTGGTGGT
CGACGTGCGCATCCTCAGCGCCACGCACAAGGACCTCGCCGCTGAAGTGGCCGCCGGGCGCTTCCGTCAGGACCTCTACT
ACCGCCTGAACGTCATCGAACTTGGCGTGCCGCCCCTGCGCGAACGCCGCGAAGACATTCCGCTGCTTACCGAGACCATG
CTCAAGCGCCTGGCGCAGCAAAGCGGCCTGCCCGCTGCGCGGCTCACGACCGAAGCACTGGACAAACTCAAGTGCTACCG
CTTCCCGGGCAACGTGCGCGAACTGGAAAACATGCTCGAGCGTGCCTACACGCTCTGCGAAGATAATGAGATCCAGGCCC
GCGACCTGCGGCTCAGCGAGGCGAGCAGCAGCGCCGAGTCAGGCGAAGCGAACCTGGCGCAGATCGATAACCTTGAGGAC
TACCTGGAGGAGATCGAGCGCAAACTGATCATGCAGGCGCTGGAAGAGACGCGCTGGAACCGCACCGCTGCTGCCCAGCG
CTTGGGCCTGACCTTCCGCTCGATGCGCTATCGGTTGAAGAAGCTGGGCATAGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Response regulator receiver domain (Response_reg) (7-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	87.191	100	0.872
pilR	Acinetobacter baumannii strain A118	49.891	100	0.515