Detailed information NTG0762688

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OU800_RS18795
• Genome accession: NZ_CP113519
• Coordinates: 4249038..4250378 (-)
• Length: 446 a.a.
• NCBI ID: WP_268178860.1
• Uniprot ID: -
• Organism: Pseudomonas sp. GOM7
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4244038..4255378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OU800_RS18780 (OU800_18780)	trxB	4245827..4246774 (-)	948	WP_268178857.1	thioredoxin-disulfide reductase	-
OU800_RS18785 (OU800_18785)	cysZ	4247033..4247764 (+)	732	WP_268178858.1	sulfate transporter CysZ	-
OU800_RS18790 (OU800_18790)	-	4247833..4249029 (+)	1197	WP_268178859.1	glycosyltransferase family 1 protein	-
OU800_RS18795 (OU800_18795)	pilR	4249038..4250378 (-)	1341	WP_268178860.1	sigma-54 dependent transcriptional regulator	Regulator
OU800_RS18800 (OU800_18800)	pilS	4250381..4251982 (-)	1602	WP_268178862.1	ATP-binding protein	Regulator
OU800_RS18805 (OU800_18805)	-	4251966..4252208 (-)	243	WP_268178864.1	PP0621 family protein	-
OU800_RS18810 (OU800_18810)	-	4252380..4253372 (-)	993	WP_268178866.1	outer membrane protein assembly factor BamD	-
OU800_RS18815 (OU800_18815)	rluD	4253512..4254486 (+)	975	WP_268178868.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
OU800_RS18820 (OU800_18820)	pgeF	4254483..4255214 (+)	732	WP_268178870.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49875.31 Da
• Isoelectric Point: 5.6250

>NTDB_id=762688 OU800_RS18795 WP_268178860.1 4249038..4250378(-) (pilR) [Pseudomonas sp. GOM7]
MTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAREPFDLCLTDMRLPDGTGLDLVQHIQQRHPQVPVAM
ITAYGSLDTAINALKAGAFDFVTKPVELGRLRELVAAAMRLRTPEDQEAPVDSRLLGESPPMKALRKQIHKLARSQAPVY
ISGESGSGKELVARLIHEQGPRAERPFVPVNCGAIPTELMESEFFGHKKGSFTGAIEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIELRVPPLRERREDIAQLAEVM
LARLAEGSGLEPARLQAEALEKLKNYRFPGNVRELENMLERAYTLCEDDQISAADLRLADACSPAGEAGEASLAQIDNLE
DYLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1341 bp

>NTDB_id=762688 OU800_RS18795 WP_268178860.1 4249038..4250378(-) (pilR) [Pseudomonas sp. GOM7]
ATGACCCGCCAGAGAGCCTTGATCGTCGACGACGAACCGGATATCCGCGAATTGCTGGAAATCACCCTGGGCCGCATGAA
GCTGGACACCCGTAGCGCACGCAACGTCAAGGAAGCGCGCGAGTGGCTGGCCCGCGAGCCCTTCGACCTGTGCCTGACCG
ACATGCGCCTGCCCGATGGCACCGGTCTGGATCTGGTGCAGCACATCCAGCAGCGTCACCCACAGGTGCCGGTGGCGATG
ATCACCGCCTACGGCAGCCTCGATACCGCGATCAATGCGCTCAAGGCTGGCGCCTTCGACTTCGTCACCAAACCGGTGGA
GCTGGGCCGGCTGCGCGAACTGGTGGCCGCTGCCATGCGCCTGCGCACCCCGGAGGATCAGGAGGCACCCGTCGACAGCC
GCCTGCTCGGCGAGTCGCCGCCGATGAAGGCACTGCGCAAGCAGATCCACAAGCTCGCGCGCAGTCAGGCGCCGGTGTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCGCGCCTGATTCACGAGCAGGGCCCGCGCGCCGAGCGGCCCTT
CGTCCCGGTCAACTGCGGGGCGATTCCCACCGAGCTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCAGCTTCACCG
GCGCTATCGAAGATAAGCAGGGCCTGTTCCAGGCGGCCAACGGCGGCACCCTGTTCCTCGATGAGGTGGCCGACCTGCCA
TTGCCGATGCAGGTCAAGCTGCTGCGTGCCATCCAGGAGAAGGCCGTGCGCGCGGTGGGCGGGCAGCAGGAAGTGGTGGT
CGACGTGCGCATCCTCTGCGCCACGCACAAGGATCTGGCAGCCGAGGTGGCGGCGGGGCGTTTTCGTCAGGATCTCTACT
ACCGCCTCAATGTCATCGAGCTGCGCGTGCCGCCCCTGCGCGAGCGCCGCGAGGACATCGCCCAACTGGCCGAAGTGATG
CTGGCGCGGCTGGCCGAAGGCAGCGGCCTGGAGCCAGCCAGGCTGCAAGCCGAGGCCCTGGAAAAGCTGAAGAACTACCG
CTTCCCTGGCAACGTGCGGGAGCTGGAGAACATGCTCGAGCGCGCCTACACCCTCTGCGAGGACGACCAGATCAGCGCCG
CTGACCTGCGCCTGGCCGATGCCTGCAGCCCCGCGGGGGAGGCCGGGGAGGCCAGCCTGGCGCAGATCGACAACCTCGAG
GACTACCTAGAGGACATCGAGCGCAAGCTGATCATGCAGGCGCTGGAGGAAACCCGCTGGAATCGCACGGCGGCGGCCCA
GCGCCTGGGGCTGACCTTCCGCTCGATGCGCTATCGCCTGAAGAAACTCGGTATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	88.565	100	0.886
pilR	Acinetobacter baumannii strain A118	50.327	100	0.518