Detailed information NTG0762677

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OU800_RS09315
• Genome accession: NZ_CP113519
• Coordinates: 2055387..2057612 (+)
• Length: 741 a.a.
• NCBI ID: WP_268183153.1
• Uniprot ID: -
• Organism: Pseudomonas sp. GOM7
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2050387..2062612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OU800_RS09285 (OU800_09285)	-	2050478..2050780 (-)	303	WP_268183144.1	phosphodiesterase	-
OU800_RS09290 (OU800_09290)	-	2050803..2051369 (-)	567	WP_268183146.1	PilZ domain-containing protein	-
OU800_RS09295 (OU800_09295)	-	2051510..2052757 (+)	1248	WP_268183148.1	lipoprotein-releasing ABC transporter permease subunit	-
OU800_RS09300 (OU800_09300)	lolD	2052777..2053463 (+)	687	WP_268184257.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
OU800_RS09305 (OU800_09305)	-	2053463..2054707 (+)	1245	WP_268183150.1	lipoprotein-releasing ABC transporter permease subunit	-
OU800_RS09310 (OU800_09310)	-	2054767..2055291 (-)	525	WP_268183152.1	DUF2062 domain-containing protein	-
OU800_RS09315 (OU800_09315)	comA	2055387..2057612 (+)	2226	WP_268183153.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OU800_RS09320 (OU800_09320)	exbB	2057684..2058316 (+)	633	WP_268183155.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
OU800_RS09325 (OU800_09325)	-	2058313..2058741 (+)	429	WP_268183157.1	biopolymer transporter ExbD	-
OU800_RS09330 (OU800_09330)	lpxK	2058742..2059746 (+)	1005	WP_268183159.1	tetraacyldisaccharide 4'-kinase	-
OU800_RS09335 (OU800_09335)	-	2059766..2059951 (+)	186	WP_268183161.1	Trm112 family protein	-
OU800_RS09340 (OU800_09340)	kdsB	2059952..2060716 (+)	765	WP_268183163.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OU800_RS09345 (OU800_09345)	-	2060716..2061180 (+)	465	WP_268183165.1	low molecular weight protein-tyrosine-phosphatase	-
OU800_RS09350 (OU800_09350)	murB	2061177..2062196 (+)	1020	WP_268183167.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80585.04 Da
• Isoelectric Point: 11.0984

>NTDB_id=762677 OU800_RS09315 WP_268183153.1 2055387..2057612(+) (comA) [Pseudomonas sp. GOM7]
MRAGMLALAAGLLALSFLPTLPSAQLLLVAAAVGAVLLFSRLYPLGFFLLGLAWACTSAQWALDDRLAPELDGRTLWLEG
RVVGLPEVGEGVVRFQLEGATSRRATLPQRIRLAWYGGPQLHAGERWRLAVNLKHPQGLVNPQGFDYEAWLLAQRIGATG
TIKAGRRLSPAQGLSSWRDALRQRLLAMPAMGREGGLAALVLGDGSGLSTADWRLLQHTGTVHLMVISGQHIALLAGFLY
ALVAGLARLGWWPRRLPWLPCACLLALAGALFYGLLAGFEVPVRRACVMVAMVLLWRLRFRHLGAGWPLLIALLLVLILE
PLATLQPGFWLSFAAVALLALVFGGRLGRWGWWQGLTRAQWTMAVGLLPMMLALGLPVSISGPLANLLAVPWVSLLVVPL
ALLGTLLLPIPVVGSGLLWLAGATLHLLFVMLGWIAAWLPAWLPSSLPWWAWSMALLGALLMLLPAGIPLRLPGIALLLP
ALLLPVDKPAPGRAEVWLFDVGQGLSVLVRTREHRLLYDAGPRFGDFDVGERVVLPSLRALNVSRLDLLLLSHADSDHAG
GAEAILAGLPVARLLSGEPLRRPLPRPDEPCQSGEHWQWDGVRFATWQWAQGETGNQRSCVLLIEAQGERLLLTGDIDAA
AESALLASDLSRPVHWLLAPHHGSRSSSSQALVEGLAPRHALIVRGRHNHFGHPHPQVLARYRQIGAQVHDTALSGALRL
TLGEHDRVRGEREKRRFWRGK

Nucleotide

• Length: 2226 bp

>NTDB_id=762677 OU800_RS09315 WP_268183153.1 2055387..2057612(+) (comA) [Pseudomonas sp. GOM7]
ATGCGTGCAGGGATGCTGGCGTTGGCTGCTGGATTGCTGGCCTTGTCCTTTCTACCGACCTTGCCGTCGGCGCAACTGCT
GCTGGTGGCGGCCGCTGTCGGCGCTGTGCTGCTGTTTTCCCGCCTTTATCCATTGGGTTTCTTCCTGCTAGGCCTGGCCT
GGGCCTGCACCTCGGCGCAATGGGCCCTGGATGACCGCCTGGCACCCGAGCTCGATGGCCGTACCCTGTGGCTCGAAGGG
CGGGTGGTCGGGCTGCCGGAGGTGGGCGAGGGCGTGGTGCGCTTCCAGCTCGAAGGGGCCACATCCCGACGCGCAACATT
GCCTCAGCGCATACGCCTGGCCTGGTATGGCGGGCCGCAACTGCATGCCGGTGAGCGTTGGCGCCTGGCGGTGAATCTCA
AGCATCCGCAGGGGCTGGTCAACCCGCAGGGCTTCGATTACGAAGCCTGGTTGCTGGCCCAGCGTATCGGTGCCACCGGA
ACCATCAAGGCCGGGCGACGCCTGAGCCCGGCGCAGGGCCTGAGCAGTTGGCGTGATGCTCTGCGCCAGAGGTTGCTGGC
CATGCCGGCAATGGGCCGCGAGGGTGGCCTGGCGGCGCTGGTGCTGGGCGATGGCTCCGGGCTCAGCACGGCGGACTGGC
GCCTCTTGCAGCACACCGGCACGGTGCACCTGATGGTCATTTCCGGGCAGCACATCGCCTTGCTGGCCGGTTTCCTGTAT
GCCCTGGTGGCCGGCCTGGCGCGCCTGGGCTGGTGGCCCAGGCGCCTGCCCTGGCTGCCTTGCGCCTGTCTGCTGGCGCT
GGCCGGCGCCTTGTTCTATGGACTGCTGGCGGGGTTTGAGGTGCCGGTCAGGCGCGCCTGCGTGATGGTGGCTATGGTGC
TGCTATGGCGTCTGCGTTTTCGTCATCTGGGAGCGGGTTGGCCGCTGCTGATCGCCTTGTTGCTGGTGCTGATCCTCGAA
CCCCTGGCGACGTTACAGCCGGGTTTCTGGTTGTCGTTCGCGGCGGTGGCGCTGCTGGCGTTGGTGTTCGGCGGTCGCCT
TGGGCGCTGGGGCTGGTGGCAGGGCCTGACGCGCGCGCAATGGACCATGGCCGTCGGCCTGCTGCCGATGATGCTGGCGC
TGGGGCTGCCGGTGAGCATCAGCGGGCCGCTGGCCAATCTGCTCGCGGTGCCCTGGGTGAGCCTGCTGGTGGTGCCTCTG
GCGTTGCTTGGCACCTTGCTGTTACCAATCCCCGTCGTGGGCAGCGGGCTGCTGTGGTTGGCCGGGGCTACGCTGCACCT
GCTGTTCGTCATGCTTGGCTGGATCGCCGCCTGGTTGCCGGCCTGGCTGCCCAGCAGCCTGCCCTGGTGGGCTTGGAGCA
TGGCACTGCTCGGGGCGCTGTTGATGCTCCTACCGGCGGGGATTCCCCTGCGTTTGCCGGGTATCGCATTGCTCCTGCCG
GCGTTGCTGTTGCCAGTGGACAAGCCGGCCCCTGGGCGGGCGGAGGTCTGGTTGTTCGATGTCGGCCAGGGCCTTTCTGT
ACTGGTGCGCACCCGTGAGCACCGCCTGCTTTACGATGCCGGGCCTCGTTTCGGTGATTTCGATGTCGGCGAGCGGGTGG
TGCTGCCCTCGTTGCGTGCACTCAATGTCTCGCGTCTCGATCTGCTGCTGCTCAGTCATGCCGACAGCGATCATGCCGGT
GGCGCCGAGGCGATCCTGGCCGGCCTGCCAGTGGCGCGCCTGCTCAGTGGCGAGCCCCTGCGCCGCCCGCTGCCCAGGCC
GGACGAGCCCTGCCAGAGTGGTGAACACTGGCAATGGGACGGCGTGCGCTTTGCGACCTGGCAGTGGGCGCAGGGTGAGA
CGGGCAACCAGCGTTCATGCGTGCTGTTGATCGAGGCGCAGGGGGAGCGTCTGCTGCTGACCGGCGATATCGACGCAGCC
GCCGAGTCGGCGCTGCTGGCCAGTGACCTGTCGCGCCCGGTGCACTGGCTGCTGGCGCCACACCATGGCAGTCGCAGCTC
ATCGAGCCAGGCTCTGGTCGAAGGTCTGGCTCCACGACATGCCTTGATCGTGCGTGGGCGCCACAATCATTTCGGCCACC
CGCACCCTCAGGTGCTGGCGCGCTACCGACAGATTGGCGCACAGGTGCACGACACGGCCCTCAGCGGCGCCTTGCGCTTG
ACCCTGGGCGAGCACGACAGGGTACGCGGCGAGCGGGAAAAGCGTCGCTTCTGGCGGGGAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-463)

• Domain of unknown function (DUF4131) (DUF4131) (22-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-684)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	65.139	97.166	0.633
comA	Ralstonia pseudosolanacearum GMI1000	37.161	100	0.389