Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OQH41_RS14780 Genome accession   NZ_CP113442
Coordinates   3136019..3136402 (-) Length   127 a.a.
NCBI ID   WP_265615274.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain C9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3131019..3141402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OQH41_RS14765 (OQH41_14765) - 3132911..3134989 (-) 2079 WP_000505934.1 methyl-accepting chemotaxis protein -
  OQH41_RS14770 (OQH41_14770) - 3135036..3135572 (-) 537 WP_000729759.1 chemotaxis protein CheW -
  OQH41_RS14775 (OQH41_14775) - 3135633..3135995 (-) 363 WP_000101096.1 response regulator -
  OQH41_RS14780 (OQH41_14780) pilG 3136019..3136402 (-) 384 WP_265615274.1 twitching motility response regulator PilG Regulator
  OQH41_RS14785 (OQH41_14785) - 3136685..3137323 (+) 639 WP_002027721.1 hypothetical protein -
  OQH41_RS14790 (OQH41_14790) - 3137383..3138501 (+) 1119 WP_001260815.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14230.26 Da        Isoelectric Point: 4.5762

>NTDB_id=762348 OQH41_RS14780 WP_265615274.1 3136019..3136402(-) (pilG) [Acinetobacter baumannii strain C9]
MEDAFQNLKVMVIDDSKTIRRTTETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=762348 OQH41_RS14780 WP_265615274.1 3136019..3136402(-) (pilG) [Acinetobacter baumannii strain C9]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATTCGCCGTACCACAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37