Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | OXA87_RS04900 | Genome accession | NZ_CP113435 |
| Coordinates | 1072211..1072810 (+) | Length | 199 a.a. |
| NCBI ID | WP_013101267.1 | Uniprot ID | A0A378K3H7 |
| Organism | Legionella pneumophila strain PATHC025 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1067211..1077810
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXA87_RS04885 (OXA87_04885) | - | 1069157..1070164 (-) | 1008 | WP_013101264.1 | hypothetical protein | - |
| OXA87_RS04890 (OXA87_04890) | pilM | 1070581..1071645 (+) | 1065 | WP_013101265.1 | type IV pilus assembly protein PilM | Machinery gene |
| OXA87_RS04895 (OXA87_04895) | pilN | 1071649..1072197 (+) | 549 | WP_013101266.1 | PilN domain-containing protein | Machinery gene |
| OXA87_RS04900 (OXA87_04900) | pilO | 1072211..1072810 (+) | 600 | WP_013101267.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| OXA87_RS04905 (OXA87_04905) | pilP | 1072807..1073391 (+) | 585 | WP_013101268.1 | pilus assembly protein PilP | Machinery gene |
| OXA87_RS04910 (OXA87_04910) | pilQ | 1073395..1075491 (+) | 2097 | WP_011946023.1 | type IV pilus secretin PilQ | Machinery gene |
| OXA87_RS04915 (OXA87_04915) | aroK | 1075938..1076465 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| OXA87_RS04920 (OXA87_04920) | aroB | 1076452..1077561 (+) | 1110 | WP_027219628.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22495.18 Da Isoelectric Point: 5.3369
>NTDB_id=762062 OXA87_RS04900 WP_013101267.1 1072211..1072810(+) (pilO) [Legionella pneumophila strain PATHC025]
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKSEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLNELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKSEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=762062 OXA87_RS04900 WP_013101267.1 1072211..1072810(+) (pilO) [Legionella pneumophila strain PATHC025]
ATGGACACGGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAATCAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTG
CAGCTAATGAATGAGCGTTTCGGGACCATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCCGGGCTTTTGGAAGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCACGAATTTAGTGTTGAGGGGGTGTCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAATGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAATCAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTG
CAGCTAATGAATGAGCGTTTCGGGACCATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCCGGGCTTTTGGAAGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCACGAATTTAGTGTTGAGGGGGTGTCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
98.995 |
100 |
0.99 |
| comO | Acinetobacter baylyi ADP1 |
39.791 |
95.98 |
0.382 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |