Detailed information NTG0761958

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OU419_RS19500
• Genome accession: NZ_CP113432
• Coordinates: 4201761..4203971 (-)
• Length: 736 a.a.
• NCBI ID: WP_254475064.1
• Uniprot ID: -
• Organism: Pseudomonas triclosanedens strain ZM23
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4196761..4208971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OU419_RS19465 (OU419_19465)	murB	4197126..4198145 (-)	1020	WP_254475076.1	UDP-N-acetylmuramate dehydrogenase	-
OU419_RS19470 (OU419_19470)	-	4198142..4198606 (-)	465	WP_254475074.1	low molecular weight protein-tyrosine-phosphatase	-
OU419_RS19475 (OU419_19475)	kdsB	4198606..4199373 (-)	768	WP_254475072.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OU419_RS19480 (OU419_19480)	-	4199378..4199563 (-)	186	WP_009621404.1	Trm112 family protein	-
OU419_RS19485 (OU419_19485)	lpxK	4199615..4200613 (-)	999	WP_254475070.1	tetraacyldisaccharide 4'-kinase	-
OU419_RS19490 (OU419_19490)	-	4200613..4201056 (-)	444	WP_254475068.1	biopolymer transporter ExbD	-
OU419_RS19495 (OU419_19495)	exbB	4201053..4201688 (-)	636	WP_254475066.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
OU419_RS19500 (OU419_19500)	comA	4201761..4203971 (-)	2211	WP_254475064.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OU419_RS19505 (OU419_19505)	-	4204122..4204652 (+)	531	WP_254475062.1	DUF2062 domain-containing protein	-
OU419_RS19510 (OU419_19510)	-	4204731..4205978 (-)	1248	WP_254475060.1	lipoprotein-releasing ABC transporter permease subunit	-
OU419_RS19515 (OU419_19515)	lolD	4205990..4206688 (-)	699	WP_254475056.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
OU419_RS19520 (OU419_19520)	-	4206681..4207934 (-)	1254	WP_254475054.1	lipoprotein-releasing ABC transporter permease subunit	-
OU419_RS19525 (OU419_19525)	-	4208060..4208635 (+)	576	WP_254475041.1	PilZ domain-containing protein	-
OU419_RS19530 (OU419_19530)	-	4208650..4208964 (+)	315	WP_254475039.1	phosphodiesterase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 79002.12 Da
• Isoelectric Point: 9.5099

>NTDB_id=761958 OU419_RS19500 WP_254475064.1 4201761..4203971(-) (comA) [Pseudomonas triclosanedens strain ZM23]
MIALALGMLALRWVPTLPPIWLLLVLVFLALPLLLSRFCFVSLCLLGFVWACHSAQGALDDRLPRALDGRTLWLEGTVEG
LPDRSGPSVRFILANVSSPRMKLPQRMRLSWFAGPPVTGGERWRLAVKLKLPHGMANEAGFDYEAWLTAQRIGATGSVKA
GERLAAASGPAGWREAWRQRLLSVDADGRSGALVALVLGDASGLSSVDWQVLQDTGTLHLMVISGSHVSLLAGLLYLLVA
GMARRGIWPSRIPWLPCACLLAAAVAWSYGLMAGFDVPVRRACVMVSMVLLWRLCYRRAGLWTPLLGALLLVLSSEPLVV
LSAGFWLSYSAVALLIFGFAGRLGRWMAWLTWLRAQWVMALGLLPASMALGLPLSISGMLANLIAVPWVELAVVPLALIG
SLTLWVPWLGESLLWLAGAALDVLFRSLEWMASLAPAWQPTAAPAWALLLALVGVLLILAPAGVPGRALGVAMLLPMFFP
PLSVPAPGLAEVRVLDVGQGLSVLIRTHSSAWLYDAGPRSGDFDAGARVVVPVMRSLGVRRLDMLMLSHADSDHAGGALA
VSMAMRPRETVGGEVERLPAGLAAKPCSAREWIVDGVRLSSWAWLAAQDSNGRSCVLRIEANGEVLLLTGDLPLVAESAW
LAAHPQAHVDWLLAGHHGSRSSSGASFLRALKPSAALISRGASNPYGHPHPSVVQRFRAQGIEIHDTAEEGALLVMLGAR
EPLQGVRQSAHFWQEK

Nucleotide

• Length: 2211 bp

>NTDB_id=761958 OU419_RS19500 WP_254475064.1 4201761..4203971(-) (comA) [Pseudomonas triclosanedens strain ZM23]
ATGATCGCGCTGGCGTTGGGGATGCTGGCGCTACGGTGGGTGCCGACGCTGCCGCCGATCTGGCTGCTGCTGGTGCTGGT
GTTTCTCGCCTTGCCGCTGCTATTGAGTCGCTTCTGTTTCGTCAGTCTGTGCCTGTTGGGGTTCGTCTGGGCCTGCCATT
CGGCCCAGGGAGCGTTGGATGACCGGCTGCCCAGGGCGCTGGATGGGCGCACCCTCTGGCTGGAGGGGACGGTTGAGGGC
TTGCCGGACCGTAGCGGACCGTCGGTGCGCTTCATTCTCGCCAACGTGTCCAGCCCGCGCATGAAGCTGCCGCAGCGCAT
GCGTTTGTCTTGGTTCGCGGGCCCTCCAGTGACGGGCGGCGAACGCTGGCGGCTGGCGGTCAAGCTCAAGCTGCCGCATG
GTATGGCCAACGAGGCCGGGTTTGACTACGAGGCCTGGCTGACTGCGCAACGCATCGGGGCGACCGGCAGCGTAAAGGCC
GGCGAGCGTCTGGCTGCGGCCAGCGGGCCGGCCGGCTGGCGAGAAGCCTGGCGACAGCGCTTGCTGTCGGTCGATGCCGA
CGGGAGATCCGGTGCCCTGGTGGCTCTCGTTCTGGGCGACGCGTCCGGACTGAGCAGCGTGGATTGGCAGGTGCTACAGG
ATACGGGGACCCTGCATCTGATGGTGATCTCCGGATCGCACGTCTCGCTGCTGGCCGGTCTGCTGTACCTGTTGGTCGCG
GGGATGGCCAGGCGTGGAATCTGGCCGTCCCGGATTCCCTGGTTGCCCTGTGCGTGTCTGCTGGCGGCGGCTGTCGCCTG
GTCGTATGGCCTGATGGCGGGTTTCGACGTTCCGGTGCGGCGCGCCTGTGTCATGGTCTCGATGGTGCTGCTCTGGCGTT
TGTGCTATCGCCGTGCGGGCTTGTGGACGCCATTGCTCGGTGCGCTGCTGCTGGTGTTGTCGAGTGAGCCGTTGGTGGTC
CTGTCGGCGGGGTTCTGGCTGTCATATTCGGCCGTTGCACTGCTCATCTTCGGTTTTGCCGGTCGTCTGGGCCGGTGGAT
GGCCTGGCTGACGTGGCTGCGGGCGCAGTGGGTCATGGCTCTCGGGTTGCTGCCGGCGTCGATGGCGCTGGGGTTGCCGC
TCAGCATCAGTGGGATGCTGGCAAATCTTATCGCTGTGCCCTGGGTGGAACTGGCGGTGGTTCCGCTGGCGTTGATCGGC
AGTCTGACGCTATGGGTGCCCTGGCTCGGCGAGTCGCTGCTGTGGCTGGCTGGTGCAGCGCTGGATGTACTGTTCCGATC
GCTGGAGTGGATGGCTTCGCTCGCTCCAGCCTGGCAGCCGACCGCGGCGCCGGCCTGGGCTTTGCTGCTGGCTCTGGTCG
GCGTCCTGCTGATACTGGCGCCTGCCGGTGTGCCGGGGCGGGCGCTGGGCGTCGCCATGTTGTTGCCCATGTTCTTTCCC
CCATTGTCGGTGCCGGCGCCAGGGCTCGCCGAGGTGCGCGTGCTCGATGTGGGGCAGGGCTTGTCGGTACTGATTCGAAC
GCACTCGAGCGCCTGGCTCTACGACGCAGGACCACGCAGTGGCGACTTCGACGCAGGCGCCCGCGTGGTGGTGCCGGTCA
TGCGCAGCCTGGGGGTACGGCGCCTCGACATGCTGATGCTCAGCCACGCCGACAGCGATCATGCGGGCGGGGCGCTGGCG
GTCAGCATGGCCATGCGGCCGCGAGAGACCGTCGGCGGCGAGGTGGAGCGCCTGCCCGCGGGGCTTGCTGCGAAGCCTTG
CAGCGCTCGGGAGTGGATAGTCGACGGGGTACGACTTTCCAGTTGGGCGTGGTTGGCGGCACAGGACAGCAACGGACGAT
CCTGCGTGCTCAGGATCGAGGCGAATGGCGAGGTGTTGCTGCTGACGGGCGATCTGCCGCTGGTTGCGGAGTCGGCATGG
TTGGCTGCGCACCCTCAGGCTCATGTCGATTGGTTGCTGGCAGGTCATCATGGCAGCCGGAGTTCTTCGGGCGCCTCGTT
TCTGCGGGCGTTGAAACCCTCCGCGGCGTTGATATCCCGTGGTGCCAGCAATCCCTATGGGCATCCGCATCCGTCGGTCG
TGCAGCGCTTTCGCGCACAGGGCATCGAGATTCACGATACGGCGGAGGAGGGCGCGCTACTGGTAATGCTGGGTGCACGT
GAGCCGCTCCAGGGAGTGCGGCAGAGCGCACATTTCTGGCAGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (19-163)

• Competence protein (Competence) (196-460)

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	57.778	97.826	0.565
comA	Ralstonia pseudosolanacearum GMI1000	34.402	100	0.379