Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | LDN16_RS04325 | Genome accession | NZ_AP024961 |
| Coordinates | 964367..964684 (+) | Length | 105 a.a. |
| NCBI ID | WP_011215002.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain 80-045 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 959367..969684
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDN16_RS04305 (LEG80045_08280) | - | 959519..960958 (+) | 1440 | WP_011214998.1 | cation:proton antiporter | - |
| LDN16_RS04310 (LEG80045_08290) | nadC | 960955..961797 (+) | 843 | WP_061637698.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| LDN16_RS04315 (LEG80045_08300) | - | 961794..962885 (+) | 1092 | WP_010946544.1 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | - |
| LDN16_RS04320 (LEG80045_08310) | - | 962860..964275 (+) | 1416 | WP_027225212.1 | M20 family metallopeptidase | - |
| LDN16_RS04325 (LEG80045_08320) | comEA | 964367..964684 (+) | 318 | WP_011215002.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| LDN16_RS04330 (LEG80045_08330) | - | 964880..965917 (+) | 1038 | WP_011213320.1 | rod shape-determining protein | - |
| LDN16_RS04335 (LEG80045_08340) | mreC | 965895..966803 (+) | 909 | WP_223919070.1 | rod shape-determining protein MreC | - |
| LDN16_RS04340 (LEG80045_08350) | mreD | 966800..967279 (+) | 480 | WP_223919071.1 | rod shape-determining protein MreD | - |
| LDN16_RS04345 (LEG80045_08360) | - | 967215..967817 (-) | 603 | WP_027225211.1 | pseudouridine synthase | - |
| LDN16_RS04350 (LEG80045_08370) | - | 968078..968776 (+) | 699 | WP_027225210.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11713.73 Da Isoelectric Point: 10.6194
>NTDB_id=76066 LDN16_RS04325 WP_011215002.1 964367..964684(+) (comEA) [Legionella pneumophila strain 80-045]
MKARLIAILLSIIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
MKARLIAILLSIIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
Nucleotide
Download Length: 318 bp
>NTDB_id=76066 LDN16_RS04325 WP_011215002.1 964367..964684(+) (comEA) [Legionella pneumophila strain 80-045]
ATGAAAGCAAGACTCATTGCTATTTTGTTATCAATTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTTAATACAGCGGATGTACATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGATTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
ATGAAAGCAAGACTCATTGCTATTTTGTTATCAATTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTTAATACAGCGGATGTACATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGATTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Legionella pneumophila str. Paris |
98.095 |
100 |
0.981 |
| comEA | Legionella pneumophila strain ERS1305867 |
98.095 |
100 |
0.981 |
| comEA | Staphylococcus aureus N315 |
38.384 |
94.286 |
0.362 |
| comEA | Staphylococcus aureus MW2 |
38.384 |
94.286 |
0.362 |