Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   H7R23_RS16435 Genome accession   NZ_AP021936
Coordinates   3417710..3418114 (-) Length   134 a.a.
NCBI ID   WP_019767972.1    Uniprot ID   A0A242T1I5
Organism   Acinetobacter pittii strain WP2-W18-ESBL-11     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3412710..3423114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R23_RS16405 (WP2W18E11_32070) - 3412794..3413063 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  H7R23_RS16410 (WP2W18E11_32080) rapZ 3413060..3413911 (-) 852 WP_005066272.1 RNase adapter RapZ -
  H7R23_RS16415 (WP2W18E11_32090) panC 3413935..3414783 (-) 849 WP_182917625.1 pantoate--beta-alanine ligase -
  H7R23_RS16420 (WP2W18E11_32100) panB 3414787..3415596 (-) 810 WP_182917626.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  H7R23_RS16425 (WP2W18E11_32110) folK 3415642..3416124 (-) 483 WP_017387617.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  H7R23_RS16430 (WP2W18E11_32120) pcnB 3416121..3417584 (-) 1464 WP_057085865.1 polynucleotide adenylyltransferase PcnB -
  H7R23_RS16435 (WP2W18E11_32130) comEA 3417710..3418114 (-) 405 WP_019767972.1 ComEA family DNA-binding protein Machinery gene
  H7R23_RS16440 (WP2W18E11_32140) mazG 3418083..3418889 (-) 807 WP_019767973.1 nucleoside triphosphate pyrophosphohydrolase -
  H7R23_RS16445 (WP2W18E11_32150) - 3419002..3419775 (+) 774 WP_019767974.1 SDR family oxidoreductase -
  H7R23_RS16450 (WP2W18E11_32160) relA 3419822..3422128 (-) 2307 WP_002117181.1 RelA/SpoT family protein -

Sequence


Protein


Download         Length: 134 a.a.        Molecular weight: 15382.68 Da        Isoelectric Point: 10.5869

>NTDB_id=75986 H7R23_RS16435 WP_019767972.1 3417710..3418114(-) (comEA) [Acinetobacter pittii strain WP2-W18-ESBL-11]
MQLSMNLWKNKHNIFIVLFWSLISSALVQAQSFDQNFKEWKAKQQMYDQKLSVQRPSHSNSPKSSVMTDSSGQIHLNQAN
IDELQKLKGIGEKKAQAIVEYRQKNGGFKNIDEFKNVKGIGPAIFEKNKTRLTL

Nucleotide


Download         Length: 405 bp        

>NTDB_id=75986 H7R23_RS16435 WP_019767972.1 3417710..3418114(-) (comEA) [Acinetobacter pittii strain WP2-W18-ESBL-11]
ATGCAGCTCAGCATGAATCTTTGGAAGAATAAACACAATATTTTCATTGTTTTATTTTGGAGCCTGATCTCATCAGCCCT
AGTTCAGGCTCAATCTTTTGATCAAAATTTTAAGGAGTGGAAAGCGAAACAGCAGATGTATGATCAGAAGTTGAGCGTGC
AGCGGCCCTCTCATTCTAATAGTCCAAAAAGTTCAGTTATGACTGATTCGTCAGGGCAAATTCACTTAAATCAAGCCAAT
ATTGATGAGCTCCAAAAGCTAAAAGGTATTGGTGAGAAAAAGGCTCAGGCGATTGTGGAATACCGTCAAAAGAATGGTGG
CTTTAAAAATATTGATGAATTTAAAAACGTAAAGGGTATTGGTCCAGCCATTTTTGAAAAGAATAAAACGCGTTTGACTT
TATAA

Domains


Predicted by InterproScan.

(71-133)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A242T1I5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

69.343

100

0.709

  comEA Acinetobacter baumannii D1279779

69.343

100

0.709

  comEA Acinetobacter baylyi ADP1

42.742

92.537

0.396


Multiple sequence alignment