Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   H7R23_RS04650 Genome accession   NZ_AP021936
Coordinates   979504..981936 (+) Length   810 a.a.
NCBI ID   WP_032041965.1    Uniprot ID   A0AAN4MIT5
Organism   Acinetobacter pittii strain WP2-W18-ESBL-11     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 974504..986936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R23_RS04625 (WP2W18E11_08690) - 974656..975597 (-) 942 WP_017480544.1 hypothetical protein -
  H7R23_RS04630 (WP2W18E11_08700) - 975844..976332 (+) 489 WP_078210287.1 YaiI/YqxD family protein -
  H7R23_RS04635 (WP2W18E11_08710) - 976340..977248 (+) 909 WP_005067734.1 DMT family transporter -
  H7R23_RS20145 - 977278..977379 (-) 102 Protein_879 PilZ domain-containing protein -
  H7R23_RS04640 (WP2W18E11_08720) lolC 977508..978743 (+) 1236 WP_031944989.1 lipoprotein-releasing ABC transporter permease subunit -
  H7R23_RS04645 (WP2W18E11_08730) lolD 978736..979422 (+) 687 WP_002118798.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  H7R23_RS04650 (WP2W18E11_08740) comA/comEC 979504..981936 (+) 2433 WP_032041965.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  H7R23_RS04655 (WP2W18E11_08750) - 981889..982872 (-) 984 WP_080612814.1 lysophospholipid acyltransferase family protein -
  H7R23_RS04660 (WP2W18E11_08760) sppA 983006..984022 (+) 1017 WP_182917848.1 signal peptide peptidase SppA -
  H7R23_RS04665 (WP2W18E11_08770) - 984046..984846 (+) 801 WP_002118584.1 alpha/beta fold hydrolase -
  H7R23_RS04670 (WP2W18E11_08780) purN 984924..985553 (-) 630 WP_002118669.1 phosphoribosylglycinamide formyltransferase -
  H7R23_RS04675 (WP2W18E11_08790) purM 985550..986620 (-) 1071 WP_002118876.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92777.38 Da        Isoelectric Point: 9.0838

>NTDB_id=75975 H7R23_RS04650 WP_032041965.1 979504..981936(+) (comA/comEC) [Acinetobacter pittii strain WP2-W18-ESBL-11]
MLKLILMGWIGGIVFMGIDIPLIMQYGWLGKVLLVIGFILYIFKRNLFLNRPILKAIYCLVCAISLFTIGHQYAQHALNE
RLELRQMQLKSLDIIVYVDRISEEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVISAIDEPKLQLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSAFSVQHIEPLSSDEIYQLGYQHHLKEQQKFFNRQKLNVEKLRLTFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWVLHQLIRRYYPQLYLRQPKQIWTMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFASLVLIKVPVKPFSLLVYSASLLLLFDPFSVLSAGFWLSYGSCFILLRIYQTIEQAPNVVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFKSFGNLLFQIND
VLISIVLSCFNLLEKLSLPLQGFSLTPLALVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSQQVQLNIIDVGQGQ
AIFLQHPQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQAFPIKQVISNERWTEQ
IKEPFTYCHQGQKWQYPQLDIEILWPKEKDLNLVSSNQNQYSCVVYIHLKQINGYQNYLIMGDAGWEAEYQLMKEYPDFK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVLARIQELNIPFKSTVEQGTLSFVSRNQEMVLYTRR
LERTWLHRNL

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=75975 H7R23_RS04650 WP_032041965.1 979504..981936(+) (comA/comEC) [Acinetobacter pittii strain WP2-W18-ESBL-11]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGTATTTATGGGGATAGATATCCCTTTAATAATGCAATATGG
GTGGTTAGGTAAAGTCTTGCTTGTTATCGGCTTTATTCTTTATATTTTTAAGAGAAATTTATTCTTAAATCGCCCCATAT
TAAAAGCTATTTACTGTCTAGTCTGTGCTATTAGTCTTTTTACTATAGGACATCAATATGCTCAGCATGCCTTAAATGAA
AGATTAGAACTGCGACAAATGCAGCTTAAATCTTTAGATATTATCGTGTATGTCGATCGTATAAGTGAAGAAAAAGAAGA
TAAAACACAACAACCCGTTCAGGTACTAGGGCAGTCCCTACATCCCGTCAATTGGCTATTATATTTAAAAAATCAAAAAG
TAATCTCAGCTATAGATGAGCCAAAATTACAATTAGGTCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TACGCAGTGGCTGGTGTTTTTGACCAAGAACAATGGTTCATTCAACGAAATATAATGTCCGCTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAATTTATCAGTTGGGTTATCAACATCATTTAAAAGAGCAACAAAAATTCTTTAACAGAC
AAAAGTTAAATGTAGAAAAGTTGCGCCTAACATTTAGATTAATGTTAAAACAATCTCCTTTGCAAAATAAAGGTCTGTTA
TTAGCTTTGTTAACAGGGGACGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATCT
GTTAGCCATTTCAGGGCCTCATGTACTCATTTTTGCTATCATGTTGTCTTGGGTATTACATCAATTAATAAGACGTTATT
ATCCGCAGCTTTATTTGCGTCAACCTAAACAAATTTGGACCATGATTCCATTATGTTTTGGTGTTTTGATTTATACGGCA
TTTGTTGGTTTTGAAATTCCTGCCTTAAGAACTTTACTCTCAGTATTTTTATTTGCTTCTTTGGTATTGATTAAAGTGCC
TGTTAAACCATTTTCACTCTTGGTTTATAGTGCAAGTCTACTTTTACTTTTCGATCCCTTCAGTGTTTTATCCGCAGGTT
TTTGGCTGTCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATGTTGTTTCAACT
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTATGTCCCTT
AATGCTGATTTTCTTTCAACAGATTTCATGGGTTGCTCCTTTTACAAATATTATTGCAGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAATATTTTTGCAGCTTGTGTATGGCTTATTTTTAAATCATTCGGAAATTTACTTTTTCAAATTAATGAC
GTCCTGATTAGTATAGTACTGTCATGTTTTAATCTTTTAGAAAAGTTATCTCTACCATTACAAGGTTTTAGCCTGACACC
ACTTGCTTTAGTTTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCAAAATCTTGGGGGCTAA
TATGCTGTTTACCCTTGATCATTCCAGATAAGTCGTCCCAGCAAGTTCAATTAAATATTATAGACGTAGGACAGGGGCAA
GCTATTTTCTTGCAGCACCCGCAGCAGACATGGCTCATCGATACGGGTGGGTCTTATGATGAGAAAGCTTTTAGTATTGG
TCAAAATGTGGTGATTCCATATTTACGTCAAAAGGGAATTAAACAACTGGATCACGTCGTACTGTCTCATCTTGATCAAG
ATCATAGCGGAGCATTTCCTTCAATCGCTCAGGCTTTTCCTATTAAACAAGTCATATCAAATGAACGATGGACAGAGCAA
ATTAAAGAACCATTTACCTATTGTCATCAAGGTCAAAAATGGCAATATCCACAATTAGATATTGAAATCCTTTGGCCTAA
AGAAAAAGATTTAAACTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTGGTTTATATTCATTTAAAACAGATAAATG
GCTATCAAAATTATTTAATTATGGGTGATGCAGGGTGGGAAGCAGAATATCAACTCATGAAAGAATATCCTGATTTCAAG
GTAGATGTTCTGGTATTAGGTCATCATGGAAGTAAACATAGTTCAGCTTACGACTTCTTAGCGACGTTAAACCCCAAGCT
TGTTGTTGCTTCTGCTGGCTTTAATAATCGTTATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAATACAAGAGCTTAATA
TTCCATTTAAAAGCACAGTTGAGCAAGGAACATTGAGCTTTGTATCTCGCAATCAAGAGATGGTTTTATACACTCGACGT
CTCGAGCGTACTTGGCTTCACAGGAATTTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

70.21

99.877

0.701

  comA/comEC Acinetobacter baumannii strain A118

69.592

99.877

0.695

  comA/comEC Acinetobacter baylyi ADP1

48.954

100

0.491


Multiple sequence alignment