Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   H7R23_RS03395 Genome accession   NZ_AP021936
Coordinates   691338..691721 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain WP2-W18-ESBL-11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 686338..696721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7R23_RS03385 (WP2W18E11_06420) nolF 689238..690347 (-) 1110 WP_080973437.1 efflux RND transporter periplasmic adaptor subunit -
  H7R23_RS03390 (WP2W18E11_06430) - 690416..691054 (-) 639 WP_033850745.1 hypothetical protein -
  H7R23_RS03395 (WP2W18E11_06440) pilG 691338..691721 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  H7R23_RS03400 (WP2W18E11_06450) pilH 691744..692106 (+) 363 WP_002116220.1 response regulator -
  H7R23_RS03405 (WP2W18E11_06460) pilI 692167..692703 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  H7R23_RS03410 (WP2W18E11_06470) pilJ 692746..694824 (+) 2079 WP_182917801.1 methyl-accepting chemotaxis protein -

Sequence


Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=75973 H7R23_RS03395 WP_000389061.1 691338..691721(+) (pilG) [Acinetobacter pittii strain WP2-W18-ESBL-11]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=75973 H7R23_RS03395 WP_000389061.1 691338..691721(+) (pilG) [Acinetobacter pittii strain WP2-W18-ESBL-11]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1

  vicR Streptococcus mutans UA159

42.735

92.126

0.394

  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37


Multiple sequence alignment