Detailed information NTG0757950

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OPS05_RS20505
• Genome accession: NZ_CP111114
• Coordinates: 4555496..4557709 (-)
• Length: 737 a.a.
• NCBI ID: WP_134787084.1
• Uniprot ID: -
• Organism: Pseudomonas koreensis strain FP1691
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4550496..4562709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OPS05_RS20470 (OPS05_20470)	murB	4550866..4551885 (-)	1020	WP_134787080.1	UDP-N-acetylmuramate dehydrogenase	-
OPS05_RS20475 (OPS05_20475)	-	4551882..4552346 (-)	465	WP_134787081.1	low molecular weight protein-tyrosine-phosphatase	-
OPS05_RS20480 (OPS05_20480)	kdsB	4552346..4553110 (-)	765	WP_134787082.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OPS05_RS20485 (OPS05_20485)	-	4553107..4553292 (-)	186	WP_003174668.1	Trm112 family protein	-
OPS05_RS20490 (OPS05_20490)	lpxK	4553314..4554324 (-)	1011	WP_134787083.1	tetraacyldisaccharide 4'-kinase	-
OPS05_RS20495 (OPS05_20495)	-	4554324..4554752 (-)	429	WP_097088472.1	ExbD/TolR family protein	-
OPS05_RS20500 (OPS05_20500)	exbB	4554749..4555384 (-)	636	WP_003227083.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
OPS05_RS20505 (OPS05_20505)	comA	4555496..4557709 (-)	2214	WP_134787084.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OPS05_RS20510 (OPS05_20510)	-	4557846..4558364 (+)	519	WP_098965042.1	DUF2062 domain-containing protein	-
OPS05_RS20515 (OPS05_20515)	-	4558506..4559285 (-)	780	WP_098965044.1	ABC transporter permease	-
OPS05_RS20520 (OPS05_20520)	-	4559282..4560214 (-)	933	WP_027612335.1	ABC transporter ATP-binding protein	-
OPS05_RS20525 (OPS05_20525)	-	4560348..4560971 (-)	624	WP_134787085.1	glutathione S-transferase family protein	-
OPS05_RS20530 (OPS05_20530)	-	4561015..4561674 (-)	660	WP_134787086.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 81246.66 Da
• Isoelectric Point: 10.5337

>NTDB_id=757950 OPS05_RS20505 WP_134787084.1 4555496..4557709(-) (comA) [Pseudomonas koreensis strain FP1691]
MRTGMMALAVGLLVPVFLPVLPPVGLMMLLPLVGLMLLPFRSYPLAFLLFGFTWACVSAQWALNDRLPEALDGETRWVEG
RVVGLPQTSEGVVRFELADARSRHEKLPSLMRLAWYAGPPLNSGERWRLAVKLRRPGGLLNPDAFDYEAWLLAQRIGATG
TIKDGQRLAEANWAWRDSIRQRLMAVDAQGRGGALAALVLGDGSGLSREDWQILQDTGTVHLLVISGQHIGMLAAVIYLL
VAGLARYGWWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVGLVLLWRLRFRHLGAWWPLLLAFDALLLLDPL
ASLRPGLWLSFAAVGILIFTFGGRLGAWKWWQTWTRAQWLIALGLCPVLLALNLPISLSGPLANLLAVPWVSLLVLPPAL
LGTLLLPVPYVGAGLLWLAGGLIDWLFRGLSLIAGAWPAWISPSLPWWVLLLGSLGALLLLLPRGVPLRPLGWPLLLILL
APPRERVADGLADVWQLDVGQGLAILIRTRHHALLYDAGPRFGDFDLGERVVLPALHKLRVERIDLMLLSHADADHAGGA
LAVSRGLKVTRVISGDPPGLPAILRAEACESGRQWQWDGVSFQLWQWSAAHDSNQRSCVLQIEANGERLLLTGDVDTAAE
RVLLESPLALPTHWLQAPHHGSRSSSSMALLRALRPHSVLISRGQGNSFGHPHPLVLARYRQQGLRIYDSAQHGAIQLRL
GSFQAPRLMRQQRRFWR

Nucleotide

• Length: 2214 bp

>NTDB_id=757950 OPS05_RS20505 WP_134787084.1 4555496..4557709(-) (comA) [Pseudomonas koreensis strain FP1691]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGTTCCGGTTTTTTTGCCGGTTTTACCGCCGGTCGGGTTGAT
GATGTTGTTGCCGTTGGTGGGACTGATGTTGTTGCCGTTTCGCAGCTATCCCCTGGCGTTTCTGCTATTCGGTTTCACCT
GGGCGTGCGTCAGTGCGCAATGGGCGTTGAATGATCGCCTGCCGGAAGCGCTTGACGGCGAAACCCGTTGGGTCGAAGGG
CGGGTGGTCGGTTTGCCGCAAACCAGCGAGGGCGTGGTGCGGTTCGAGTTGGCCGATGCCCGCTCGCGACACGAAAAATT
GCCGTCGTTGATGCGTCTGGCGTGGTACGCCGGGCCGCCGCTCAACAGCGGTGAGCGCTGGCGGCTGGCGGTGAAGCTCA
GGCGCCCCGGTGGTTTGCTCAATCCCGACGCCTTTGATTACGAAGCCTGGCTGTTGGCGCAACGCATCGGCGCGACCGGC
ACGATCAAGGATGGTCAGCGCCTGGCCGAGGCAAACTGGGCATGGCGCGACAGCATTCGTCAGCGCTTGATGGCAGTCGA
TGCCCAAGGCCGGGGCGGTGCATTGGCGGCGCTGGTGCTCGGCGACGGCTCCGGGCTCAGCCGCGAGGATTGGCAGATCC
TGCAGGACACCGGCACCGTGCATCTGCTGGTGATTTCCGGTCAGCACATCGGGATGTTGGCGGCGGTCATCTATCTATTG
GTCGCCGGGCTGGCGCGCTACGGCTGGTGGCCGCTGCGCTGGCCATGGCTGCCATGGGCCTGCGGGCTGGCGTTTGCCGC
GGCGCTCGGTTACGGCTTGCTCGCCGGGTTTGATGTGCCGGTGCAACGGGCCTGCGTGATGGTCGGGCTGGTGTTGTTGT
GGCGCCTGCGCTTTCGCCATCTCGGCGCGTGGTGGCCGCTGTTGCTGGCATTCGATGCGTTGCTGTTGCTCGACCCGTTA
GCCAGTTTGCGTCCGGGTTTGTGGCTGTCGTTCGCCGCGGTGGGGATTTTGATTTTCACCTTCGGCGGGCGACTCGGTGC
GTGGAAATGGTGGCAGACCTGGACCCGCGCGCAATGGCTGATTGCGCTGGGTCTGTGCCCGGTGTTGCTGGCGCTGAACC
TGCCGATCAGCCTCAGCGGGCCATTGGCAAATCTGCTCGCGGTGCCATGGGTCAGTCTGCTGGTGCTGCCACCGGCACTG
CTCGGCACGCTGTTGTTGCCGGTGCCTTACGTCGGTGCAGGCTTGTTGTGGCTGGCCGGTGGTTTGATCGACTGGCTGTT
TCGCGGCTTGTCGCTGATCGCCGGGGCCTGGCCGGCGTGGATCTCGCCGTCGTTGCCGTGGTGGGTTTTGCTGCTCGGCA
GTCTCGGCGCCTTGCTGTTGCTGTTGCCGCGCGGGGTGCCTTTGCGACCGTTGGGCTGGCCGTTGCTGTTGATTCTGCTG
GCGCCGCCGCGCGAGCGAGTGGCCGATGGACTGGCCGATGTCTGGCAGCTCGATGTCGGTCAGGGCCTGGCGATCCTGAT
CCGCACGCGTCATCACGCGTTGCTCTACGACGCCGGTCCACGCTTTGGCGATTTCGATCTGGGGGAGCGAGTGGTGCTGC
CGGCGCTGCACAAACTGAGGGTCGAGCGCATTGATTTGATGCTGCTCAGTCATGCCGACGCCGACCACGCCGGTGGTGCG
CTGGCAGTATCGCGGGGCTTGAAAGTGACGCGGGTGATCAGCGGCGATCCGCCGGGGCTGCCCGCCATCCTGCGGGCCGA
GGCCTGTGAAAGTGGACGTCAATGGCAGTGGGACGGGGTCAGTTTTCAGCTGTGGCAATGGTCGGCGGCCCATGACAGCA
ATCAGCGCTCCTGTGTGTTGCAGATCGAGGCCAATGGCGAGCGGCTGCTGCTGACCGGCGATGTCGACACGGCTGCCGAA
CGGGTTTTGCTGGAAAGTCCGTTGGCGCTGCCGACGCACTGGCTGCAAGCGCCGCACCATGGCAGCCGCAGTTCCTCTTC
GATGGCTTTGCTGCGGGCATTACGTCCGCATTCGGTGCTGATCTCCCGGGGCCAGGGCAATTCGTTCGGTCATCCGCACC
CGCTGGTGCTCGCGCGTTATCGCCAGCAAGGGCTGCGCATCTACGACAGCGCGCAGCACGGCGCCATTCAACTGCGCCTG
GGCAGCTTTCAGGCACCGAGGCTGATGCGTCAACAACGGCGTTTCTGGCGTTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.117	97.422	0.605
comA	Ralstonia pseudosolanacearum GMI1000	34.483	100	0.366