Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   OOZ27_RS18040 Genome accession   NZ_CP110634
Coordinates   3364504..3366816 (-) Length   770 a.a.
NCBI ID   WP_144460405.1    Uniprot ID   -
Organism   Bacillus subtilis strain MG-1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3359504..3371816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS18000 (OOZ27_18000) mrpB 3359971..3360402 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  OOZ27_RS18005 (OOZ27_18005) mrpC 3360402..3360743 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  OOZ27_RS18010 (OOZ27_18010) mrpD 3360736..3362217 (+) 1482 WP_015714622.1 Na+/H+ antiporter subunit D -
  OOZ27_RS18015 (OOZ27_18015) mrpE 3362223..3362699 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  OOZ27_RS18020 (OOZ27_18020) mrpF 3362699..3362983 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  OOZ27_RS18025 (OOZ27_18025) mnhG 3362967..3363341 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  OOZ27_RS18030 (OOZ27_18030) yuxO 3363380..3363760 (-) 381 WP_015714624.1 hotdog fold thioesterase -
  OOZ27_RS18035 (OOZ27_18035) comA 3363779..3364423 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  OOZ27_RS18040 (OOZ27_18040) comP 3364504..3366816 (-) 2313 WP_144460405.1 histidine kinase Regulator
  OOZ27_RS18045 (OOZ27_18045) comX 3366832..3367053 (-) 222 WP_014114983.1 competence pheromone ComX -
  OOZ27_RS18050 (OOZ27_18050) - 3367050..3367919 (-) 870 WP_015714626.1 polyprenyl synthetase family protein -
  OOZ27_RS18055 (OOZ27_18055) degQ 3368104..3368244 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  OOZ27_RS18060 (OOZ27_18060) - 3368466..3368591 (+) 126 WP_141770195.1 hypothetical protein -
  OOZ27_RS18065 (OOZ27_18065) - 3368706..3369074 (+) 369 WP_014477834.1 hypothetical protein -
  OOZ27_RS18070 (OOZ27_18070) pdeH 3369050..3370279 (-) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89322.30 Da        Isoelectric Point: 8.0156

>NTDB_id=755525 OOZ27_RS18040 WP_144460405.1 3364504..3366816(-) (comP) [Bacillus subtilis strain MG-1]
MHRNNNFYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVNGQKGSE
IQLESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSPSAFVLILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYSVKLTVVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILDVLNIDNACVYDNSKGEITLLSKNNFKDLTYTNHEQYVKNFTGDIGKI
KEFKQGFIIKIGERGDKSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=755525 OOZ27_RS18040 WP_144460405.1 3364504..3366816(-) (comP) [Bacillus subtilis strain MG-1]
ATGCACAGAAATAATAACTTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCGGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATACAGATGAATATTATTCGGGTGTAAAAAAGGGTGACATCATTCTCGAAGTTAATGGGCAAAAAGGAAGTGAA
ATCCAGTTAGAAAGCGGAAGGTTGGTCAATGTAGAAAGCTTAACTGTTGAAAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCGCTCATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTAAGAAAATCACCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTA
GCATATGTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTATCTACTTGTCCTTACTTTAGTAAGTTGTCC
AATTTTATATATACATTTCATATATAAATACTTTGCGGAATTGGGTACAAAGTTATTCAAAAAGAAGATTTTAATCATTA
TGTATATACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCAAAC
TTGAACTTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATTCTTATCCATCAAGGGATTAGAAAAATCAAACAAAA
TGAGCAAAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCTTTTATTATCTTTTTTGTTATTC
CCTATGTGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCCTTTACACTTGTTATACCTTTTTCTTTAGTGTAT
CAATTTATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACC
TACTGTTATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTCCGTTAAACTAACAGTTGTAA
TATATTTGCTTATGTTTGCTGTCTTTTACTTTAAAGAGATTATTGACTTTCGTTTCAAGTTAAAAAGATTTACTGAAAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAATTAATAAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAGAATACAATCTTAGATGTATTAAATATAGATAATGCTTGTGTGTATGATAATTCAAAAGGAGAAATTACTCTCCTTA
GCAAGAATAACTTTAAAGATCTCACTTATACAAATCATGAGCAATATGTGAAAAATTTTACTGGTGATATCGGCAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAAATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAATTAACAAGAGATGAAATTGCATGGCTCCAAACATTAGCGTTTTATACAAATGTTTCATTGGAAAACG
TGATGAAAATAGAGGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTGG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACAAGGGAGACGTGTCATGAGTTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.437

99.87

0.564