Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OOT55_RS11820 Genome accession   NZ_CP110629
Coordinates   2726577..2726972 (-) Length   131 a.a.
NCBI ID   WP_024461427.1    Uniprot ID   -
Organism   Marinimicrobium sp. C6131     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2721577..2731972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOT55_RS11800 (OOT55_11800) - 2722225..2723088 (-) 864 WP_265366071.1 CheR family methyltransferase -
  OOT55_RS11805 (OOT55_11805) - 2723147..2725411 (-) 2265 WP_265366072.1 methyl-accepting chemotaxis protein -
  OOT55_RS11810 (OOT55_11810) - 2725524..2726066 (-) 543 WP_265366073.1 chemotaxis protein CheW -
  OOT55_RS11815 (OOT55_11815) pilH 2726102..2726464 (-) 363 WP_024461426.1 twitching motility response regulator PilH -
  OOT55_RS11820 (OOT55_11820) pilG 2726577..2726972 (-) 396 WP_024461427.1 twitching motility response regulator PilG Regulator
  OOT55_RS11825 (OOT55_11825) gshB 2727378..2728325 (+) 948 WP_265366074.1 glutathione synthase -
  OOT55_RS11830 (OOT55_11830) - 2728361..2729266 (+) 906 WP_265366075.1 energy transducer TonB -
  OOT55_RS11835 (OOT55_11835) - 2729324..2729917 (+) 594 WP_265366076.1 YqgE/AlgH family protein -
  OOT55_RS11840 (OOT55_11840) ruvX 2729919..2730323 (+) 405 WP_265366077.1 Holliday junction resolvase RuvX -
  OOT55_RS11845 (OOT55_11845) pilU 2730350..2731495 (-) 1146 WP_265366078.1 PilT/PilU family type 4a pilus ATPase Machinery gene

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14341.66 Da        Isoelectric Point: 7.8215

>NTDB_id=755455 OOT55_RS11820 WP_024461427.1 2726577..2726972(-) (pilG) [Marinimicrobium sp. C6131]
MDVSLESLKVMVIDDSKTIRRTAETLLKKAGCTVVTATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSDFK
RTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLGAIEAHVKQAEAS

Nucleotide


Download         Length: 396 bp        

>NTDB_id=755455 OOT55_RS11820 WP_024461427.1 2726577..2726972(-) (pilG) [Marinimicrobium sp. C6131]
ATGGACGTAAGTTTGGAAAGCCTGAAAGTCATGGTGATCGACGACAGTAAAACGATCCGTCGAACCGCCGAAACCCTGCT
CAAAAAAGCCGGCTGCACGGTTGTGACGGCGACGGATGGTTTTGATGCCCTGGCCAAAATCGCCGATACCCGTCCGGACA
TCATTTTCGTCGATATCATGATGCCTCGCCTGGACGGCTATCAGACCTGTGCACTGATCAAGAATAACAGCGACTTCAAG
CGCACCCCGGTCATCATGCTCTCCAGTAAGGACGGTCTGTTCGACAAGGCCAAGGGCCGTATTGTCGGTTCCGATCAGTA
CCTGACCAAACCGTTCAGCAAAAGTGAGCTGTTGGGCGCAATTGAAGCGCACGTGAAGCAAGCCGAAGCGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

95.42

0.71
  vicR Streptococcus mutans UA159

42.149

92.366

0.389