Detailed information NTG0754262

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PALA52_RS09965
• Genome accession: NZ_CP110347
• Coordinates: 2140551..2142776 (+)
• Length: 741 a.a.
• NCBI ID: WP_270125304.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PALA52
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2135551..2147776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PALA52_RS09940 (PALA52_01973)	-	2135839..2136438 (-)	600	WP_024917557.1	PilZ domain-containing protein	-
PALA52_RS09945 (PALA52_01974)	-	2136541..2137791 (+)	1251	WP_121305463.1	lipoprotein-releasing ABC transporter permease subunit	-
PALA52_RS09950 (PALA52_01975)	lolD	2137784..2138467 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PALA52_RS09955 (PALA52_01976)	-	2138537..2139781 (+)	1245	WP_205587549.1	lipoprotein-releasing ABC transporter permease subunit	-
PALA52_RS09960 (PALA52_01977)	-	2139887..2140420 (-)	534	WP_024917554.1	DUF2062 domain-containing protein	-
PALA52_RS09965 (PALA52_01978)	comA	2140551..2142776 (+)	2226	WP_270125304.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PALA52_RS09970 (PALA52_01979)	exbB	2142849..2143484 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PALA52_RS09975 (PALA52_01980)	-	2143481..2143921 (+)	441	WP_003091161.1	ExbD/TolR family protein	-
PALA52_RS09980 (PALA52_01981)	lpxK	2143921..2144919 (+)	999	WP_058017665.1	tetraacyldisaccharide 4'-kinase	-
PALA52_RS09985 (PALA52_01982)	-	2144957..2145142 (+)	186	WP_003091157.1	Trm112 family protein	-
PALA52_RS09990 (PALA52_01983)	kdsB	2145142..2145906 (+)	765	WP_263957566.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PALA52_RS09995 (PALA52_01984)	-	2145906..2146370 (+)	465	WP_121127976.1	low molecular weight protein-tyrosine-phosphatase	-
PALA52_RS10000 (PALA52_01985)	murB	2146367..2147386 (+)	1020	WP_241286862.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79876.49 Da
• Isoelectric Point: 10.5172

>NTDB_id=754262 PALA52_RS09965 WP_270125304.1 2140551..2142776(+) (comA) [Pseudomonas aeruginosa strain PALA52]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAVGLLLLPGRLYWLGLFLLGFVWACGSAQLALDGRLAAELDGRTLWLEG
RVADLPASGEGVTRFRLEEVSGARDVLLPARLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLAQRVGAV
GTVKAGQRLQQGSGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLMAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLA
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGDGLLRAAGVSLDLLFRALALLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTRGHALLYDSGARQGAFDMGERVVVPVLRSLDLRRLDGLLLSHADNDHA
GGAPTVVSRFPPGWLVSGEPARLPSPLLADSCDERSWSWDGVVFEQWAWAQASDSNERSCVLRVEADGEVLLLTGDISRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=754262 PALA52_RS09965 WP_270125304.1 2140551..2142776(+) (comA) [Pseudomonas aeruginosa strain PALA52]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGTT
GCTGGGCATGGCCGCCGTCGGGCTGTTGCTGCTGCCCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGTCT
GGGCCTGCGGCTCGGCACAACTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGACGGTCGCACCCTCTGGCTGGAAGGG
CGCGTGGCCGATCTGCCGGCGAGCGGCGAGGGGGTCACGCGCTTCCGGCTGGAGGAGGTCAGCGGTGCGCGGGACGTGCT
CCTTCCTGCGCGCCTGCGCCTGAGCTGGCGCGGCGCACCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGACCTCGCGGCCTGGTGAATGCGGCGGGTTTCGACTACGAGGCCTGGCTGCTGGCGCAGCGTGTCGGTGCCGTT
GGCACGGTGAAGGCGGGCCAACGCCTACAGCAGGGCAGCGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTGCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCGGGGTTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGATGGCGGCCTTGCACCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGCGCCTGGAGCTACGGGCTGATGGCAGGCTTTGAAGTCCCGGTGCGGCGCGCCTGTCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGTCACCTGGGCCTGCTCACGCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGCC
GAGCCGCTGGCCAGCTTGCAAGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCGCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGGGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGGCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAATCTGCTGGCGGTGCCGTGGATCGAGCTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTGCCCGGGTTGGGCGATGGGTTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGCCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGTGCGCTCTGCTGGCTGGCGCCGGCGGGCTTGCCGTTGCGTGCCCTCGGCGCCGCATTGCTGCTG
CCGGCGTTGTTACCGTCATCGCCCCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGTCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGGGCATGCCCTGCTCTACGACAGCGGTGCGCGGCAGGGGGCGTTCGACATGGGCGAGCGGG
TGGTAGTGCCGGTGCTGCGCAGCCTGGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAACGACCATGCA
GGCGGTGCTCCTACGGTCGTTTCCCGATTCCCGCCGGGCTGGCTGGTGAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GCTCGCCGACAGCTGCGACGAGCGGAGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCAGCG
ACAGCAACGAACGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATCTCGCGCGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCACCGCATCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTGTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGCGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.223	97.301	0.576
comA	Ralstonia pseudosolanacearum GMI1000	35.294	100	0.364