Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   OM992_RS04550 Genome accession   NZ_CP110268
Coordinates   882093..882884 (+) Length   263 a.a.
NCBI ID   WP_016936720.1    Uniprot ID   A0AAE2NZK7
Organism   Bacillus siamensis strain YB-1631     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 877093..887884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM992_RS04525 (OM992_04525) - 879089..879973 (+) 885 WP_264819858.1 PhzF family phenazine biosynthesis isomerase -
  OM992_RS04530 (OM992_04530) - 880050..880634 (+) 585 WP_016936723.1 nitroreductase -
  OM992_RS04535 (OM992_04535) - 880673..880864 (-) 192 WP_016936722.1 YfhD family protein -
  OM992_RS04540 (OM992_04540) - 880934..881044 (-) 111 WP_003155504.1 YfhE family protein -
  OM992_RS04545 (OM992_04545) - 881102..882001 (-) 900 WP_264819860.1 TIGR01777 family oxidoreductase -
  OM992_RS04550 (OM992_04550) recX 882093..882884 (+) 792 WP_016936720.1 recombination regulator RecX Regulator
  OM992_RS04555 (OM992_04555) - 882891..883205 (+) 315 WP_045925459.1 YfhH family protein -
  OM992_RS04560 (OM992_04560) - 883348..884541 (+) 1194 WP_264820278.1 MFS transporter -
  OM992_RS04565 (OM992_04565) - 884715..884867 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  OM992_RS04570 (OM992_04570) - 884991..885260 (+) 270 WP_016936717.1 YfhJ family protein -
  OM992_RS04575 (OM992_04575) - 885394..885921 (+) 528 WP_016936716.1 SH3 domain-containing protein -
  OM992_RS04580 (OM992_04580) - 886007..886339 (+) 333 WP_016936715.1 SdpI family protein -
  OM992_RS04585 (OM992_04585) - 886336..887196 (+) 861 WP_320109030.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31044.32 Da        Isoelectric Point: 6.2747

>NTDB_id=753640 OM992_RS04550 WP_016936720.1 882093..882884(+) (recX) [Bacillus siamensis strain YB-1631]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDEVKKAFNRAVDFLSYRMRSEKEV
RDHLKKKETPEMVIPEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKIHGEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=753640 OM992_RS04550 WP_016936720.1 882093..882884(+) (recX) [Bacillus siamensis strain YB-1631]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAACACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGTGTCGACGCCGACGTGCTCGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGAAGTGAAAAAAGCCTTTAACCGCGCCGTAGATTTTTTATCATACCGGATGCGTTCTGAAAAAGAAGTC
CGGGACCATCTGAAGAAAAAAGAAACACCTGAGATGGTCATTCCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCAAGCACCCACAAAAAAACAAACGGAAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGGAAAATCCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTTCCATTCGACGTCATCAACGCCGCCCTGGAGCAGACGGAGTATGAGAATGATGACGAAGCTG
AGATGGAAGCCCTGAAGATTCATGGGGAAAAGGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGAACAATTTTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.848

100

0.798