Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OM992_RS02000 Genome accession   NZ_CP110268
Coordinates   414733..415686 (+) Length   317 a.a.
NCBI ID   WP_045926248.1    Uniprot ID   A0AAE2NZX8
Organism   Bacillus siamensis strain YB-1631     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 409733..420686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OM992_RS01975 (OM992_01975) - 409779..411212 (+) 1434 WP_264819627.1 HAMP domain-containing sensor histidine kinase -
  OM992_RS01980 (OM992_01980) rapC 411366..412514 (+) 1149 WP_049627885.1 tetratricopeptide repeat protein Regulator
  OM992_RS01985 (OM992_01985) phrC 412498..412617 (+) 120 WP_016937261.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  OM992_RS01990 (OM992_01990) - 412759..412857 (-) 99 WP_016937260.1 YjcZ family sporulation protein -
  OM992_RS01995 (OM992_01995) - 412954..414318 (-) 1365 WP_016937259.1 aspartate kinase -
  OM992_RS02000 (OM992_02000) ceuB 414733..415686 (+) 954 WP_045926248.1 ABC transporter permease Machinery gene
  OM992_RS02005 (OM992_02005) - 415676..416623 (+) 948 WP_264819630.1 iron chelate uptake ABC transporter family permease subunit -
  OM992_RS02010 (OM992_02010) - 416617..417375 (+) 759 WP_016937256.1 ABC transporter ATP-binding protein -
  OM992_RS02015 (OM992_02015) - 417397..418341 (+) 945 WP_016937255.1 siderophore ABC transporter substrate-binding protein -
  OM992_RS02020 (OM992_02020) - 418383..419807 (-) 1425 WP_047476239.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34975.26 Da        Isoelectric Point: 9.6741

>NTDB_id=753638 OM992_RS02000 WP_045926248.1 414733..415686(+) (ceuB) [Bacillus siamensis strain YB-1631]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQASTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGMKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNIVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=753638 OM992_RS02000 WP_045926248.1 414733..415686(+) (ceuB) [Bacillus siamensis strain YB-1631]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTATTGGCGTGTACTTCTATTTTTATCGGTGTAGAAGACTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAAGTACATTATTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TTGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGGATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATTGCTTTTATTTTCGCATTGGCGGGAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAGTCGCCACGTTTATCGCGTATAAATACGATCTGATC
CAAAACCTGTCGTCCTGGCTGCAGGGGGATTTCTCATTGGTCGTCAAAGGCCGGTACGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCA
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCGTCACTTGTGATTCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATCGTGTCGATCTACAAAGGGGACAACCTGAGGAGCAGCCTGCCCCACAC
AGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCTTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGCTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.165

99.685

0.53