Detailed information NTG0753596

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: OMK57_RS17955
• Genome accession: NZ_CP110264
• Coordinates: 3571950..3573107 (-)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus halotolerans strain HMB20199
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3566950..3578107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OMK57_RS17925 (OMK57_17925)	-	3567203..3567622 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
OMK57_RS17930 (OMK57_17930)	comFC	3567696..3568418 (-)	723	WP_044159461.1	amidophosphoribosyltransferase	Machinery gene
OMK57_RS17935 (OMK57_17935)	-	3568382..3568678 (-)	297	WP_069486850.1	late competence development ComFB family protein	-
OMK57_RS17940 (OMK57_17940)	comFA	3568735..3570129 (-)	1395	WP_069486849.1	ATP-dependent helicase ComFA	Machinery gene
OMK57_RS17945 (OMK57_17945)	-	3570236..3571081 (-)	846	WP_059335045.1	DegV family protein	-
OMK57_RS17950 (OMK57_17950)	degU	3571178..3571867 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
OMK57_RS17955 (OMK57_17955)	degS	3571950..3573107 (-)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
OMK57_RS17960 (OMK57_17960)	-	3573324..3573977 (+)	654	WP_044159478.1	YigZ family protein	-
OMK57_RS17965 (OMK57_17965)	-	3573977..3575155 (+)	1179	WP_059292434.1	LCP family protein	-
OMK57_RS17970 (OMK57_17970)	-	3575227..3576303 (-)	1077	WP_264798201.1	glycosyltransferase family 4 protein	-
OMK57_RS17975 (OMK57_17975)	tuaH	3576447..3577637 (-)	1191	WP_083244510.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=753596 OMK57_RS17955 WP_024123030.1 3571950..3573107(-) (degS) [Bacillus halotolerans strain HMB20199]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=753596 OMK57_RS17955 WP_024123030.1 3571950..3573107(-) (degS) [Bacillus halotolerans strain HMB20199]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGACTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGCCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTCGAACTGACAATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGTTAGGCCTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCGCAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGACGGCCCTGCACAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATTGAACGGATTTTCCGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGCCAAAATGTGCGGAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGAACCATGACTATAGATTCAAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992