Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   UKS_RS05800 Genome accession   NZ_AP021887
Coordinates   1130374..1131183 (-) Length   269 a.a.
NCBI ID   WP_156012160.1    Uniprot ID   A0A6H3SI49
Organism   Streptococcus sp. 116-D4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1125374..1136183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UKS_RS05785 (UKS_11080) - 1126108..1128009 (-) 1902 WP_156012157.1 ABC-F family ATP-binding cassette domain-containing protein -
  UKS_RS05790 (UKS_11090) - 1128163..1129881 (+) 1719 WP_156012158.1 phospho-sugar mutase -
  UKS_RS05795 (UKS_11100) - 1129993..1130340 (+) 348 WP_156012159.1 thioredoxin -
  UKS_RS05800 (UKS_11110) vicX 1130374..1131183 (-) 810 WP_156012160.1 MBL fold metallo-hydrolase Regulator
  UKS_RS05805 (UKS_11120) micB 1131185..1132534 (-) 1350 WP_156012161.1 cell wall metabolism sensor histidine kinase VicK Regulator
  UKS_RS05810 (UKS_11130) micA 1132527..1133234 (-) 708 WP_049497334.1 response regulator YycF Regulator
  UKS_RS05815 (UKS_11140) mutY 1133290..1134465 (-) 1176 WP_156012162.1 A/G-specific adenine glycosylase -
  UKS_RS05820 (UKS_11150) pta 1134744..1135718 (-) 975 WP_049497328.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30003.06 Da        Isoelectric Point: 6.0384

>NTDB_id=75359 UKS_RS05800 WP_156012160.1 1130374..1131183(-) (vicX) [Streptococcus sp. 116-D4]
MCETGFKYSILASGSSGNSFYLETPKKKLLVDAGLSGKKITSLLAEINRKPEELDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKYIFEMGKTKTFGDIDIESFGVSHDAIAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKIYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=75359 UKS_RS05800 WP_156012160.1 1130374..1131183(-) (vicX) [Streptococcus sp. 116-D4]
ATGTGTGAAACAGGTTTTAAATACAGTATTTTAGCGTCGGGTTCCAGTGGAAATTCCTTTTATTTGGAAACCCCAAAAAA
GAAGCTTTTAGTGGATGCGGGCTTGTCTGGTAAGAAAATTACCAGCCTACTTGCTGAAATAAATCGCAAGCCAGAAGAGT
TGGATGCCATCTTGATTACCCATGAGCATTCTGACCATATTCATGGAGTAGGTGTTTTAGCTCGCAAGTATGGTATGGAT
TTGTATGCCAATGAAAAGACCTGGCAGGCTATGGAAAATAGCAAGTATCTTGGCAAGGTGGATTCTTCGCAAAAGTATAT
CTTTGAAATGGGTAAAACCAAAACCTTTGGAGATATCGACATCGAGAGTTTTGGTGTTAGTCATGATGCGATTGCACCGC
AGTTCTATCGCTTTATGAAGGATGATAAGAGTTTTGTTATGCTGACTGATACAGGTTATGTTAGTGACCGTATGGCAGGG
ATTGTCGAGAATGCAGATGGCTATCTTATCGAGTCCAATCATGATGTAGAGATTTTGCGAGCAGGTTCTTACGCTTGGCG
ACTCAAACAACGAATCCTATCAGATCTTGGTCACCTTTCTAACGAGGATGGTGCTGAAGCAATGATTCGGACGCTAGGAA
ATCGCACTAAGAAAATCTATCTTGGTCACTTGTCTAAGGAGAACAATATCAAGGAACTGGCTCATATGACCATGGTCAAT
CAGCTAGCTCAGGCTGATCTAGGAGTCGGAGTAGACTTTAAGATTTACGATACCTCACCAGATACCGCAACACCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H3SI49

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777

Multiple sequence alignment