Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   OMK57_RS16055 Genome accession   NZ_CP110264
Coordinates   3187851..3190169 (-) Length   772 a.a.
NCBI ID   WP_069486981.1    Uniprot ID   -
Organism   Bacillus halotolerans strain HMB20199     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3182851..3195169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OMK57_RS16015 (OMK57_16015) - 3183319..3183750 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  OMK57_RS16020 (OMK57_16020) - 3183750..3184091 (+) 342 WP_044158938.1 Na(+)/H(+) antiporter subunit C -
  OMK57_RS16025 (OMK57_16025) - 3184084..3185565 (+) 1482 WP_069486983.1 Na+/H+ antiporter subunit D -
  OMK57_RS16030 (OMK57_16030) - 3185571..3186047 (+) 477 WP_044158941.1 Na+/H+ antiporter subunit E -
  OMK57_RS16035 (OMK57_16035) - 3186047..3186331 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  OMK57_RS16040 (OMK57_16040) mnhG 3186315..3186689 (+) 375 WP_059292644.1 monovalent cation/H(+) antiporter subunit G -
  OMK57_RS16045 (OMK57_16045) - 3186728..3187108 (-) 381 WP_069486982.1 hotdog fold thioesterase -
  OMK57_RS16050 (OMK57_16050) comA 3187126..3187770 (-) 645 WP_024122680.1 two-component system response regulator ComA Regulator
  OMK57_RS16055 (OMK57_16055) comP 3187851..3190169 (-) 2319 WP_069486981.1 sensor histidine kinase Regulator
  OMK57_RS16060 (OMK57_16060) comX 3190189..3190365 (-) 177 WP_041906074.1 competence pheromone ComX -
  OMK57_RS16065 (OMK57_16065) - 3190380..3191273 (-) 894 WP_306481639.1 polyprenyl synthetase family protein -
  OMK57_RS16070 (OMK57_16070) degQ 3191404..3191544 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  OMK57_RS16075 (OMK57_16075) - 3192005..3192373 (+) 369 WP_044158947.1 hypothetical protein -
  OMK57_RS16080 (OMK57_16080) - 3192349..3193578 (-) 1230 WP_059334756.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 772 a.a.        Molecular weight: 90119.27 Da        Isoelectric Point: 8.1991

>NTDB_id=753589 OMK57_RS16055 WP_069486981.1 3187851..3190169(-) (comP) [Bacillus halotolerans strain HMB20199]
MKNFKRNFSIVLVLFSLLYFAYIVYFTQNGILVGTYVSETANHELKVEKMTKSTYGKYMGLKEGDLILEVSGKKPTSENI
KRNYLAKAEHLKVKRDNHEIQLHNMEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYLHFLYQYFKELSIKFSSRYTVNMLYMLPIINVIIEFTEKYLPSGITTNIS
NINLVTFLIEITVVYFCIIYYGIIYRKKDHYYLLKVLLISNTVAFFPFSVLYILPEVLFGQYIYSAIVTAPFLIIIPLAL
VYQFVVNKIYDIDFILGRIRYYSFLSIIPTIGIVWLSIVFDSKRADFNVILITLCTFIIFLSVFYIKELLDYKFRLKRFS
EKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYTFEVGSDREIIYFDKQSVEPNWKLYKTEFENVTKEIG
KIVEVNQGFLIKVGEKGTSSYVLLCLSSINTPRLTRDEVSWLKTLSFYTSVSMENVVQIEELMDHLQALKREDANPVWLK
KLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLAEFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQL
LYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYE
DDGVGFDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2319 bp        

>NTDB_id=753589 OMK57_RS16055 WP_069486981.1 3187851..3190169(-) (comP) [Bacillus halotolerans strain HMB20199]
TTGAAAAACTTTAAAAGAAATTTTTCTATAGTGCTAGTATTATTTAGTCTCTTATATTTTGCTTATATTGTTTATTTCAC
TCAGAATGGTATTTTAGTTGGTACTTATGTTTCTGAAACAGCCAATCATGAGTTAAAAGTTGAAAAAATGACAAAATCCA
CATATGGAAAATATATGGGATTAAAAGAAGGCGACTTAATACTCGAAGTAAGTGGGAAGAAACCTACAAGCGAAAATATT
AAAAGAAATTATTTAGCAAAAGCTGAACATTTAAAAGTTAAAAGGGATAATCATGAAATTCAATTACATAATATGGAGTA
TATCTCTTTAAATAATTCTTATAGCTTTTTCATTTATATTATCCCTTGTATATTTTTTGCTTTGAGTCTGTTATGTGCTT
TTTATATTTATAGGGTCAATCGAGTGAAAAATACGTACTCGGCTTATATTTTGATTAATTTTTTGCTGTTTATATCGATA
GCATATTTAAGTGCTGGAGGCGTTACTAGAGGATATGAAATAAATAGATATATTAATCTTTTTACCTTTTTAAATGTACC
TGTCTTGTATTTGCATTTTCTATATCAATATTTCAAAGAATTAAGCATCAAATTTTCATCACGTTATACCGTGAACATGT
TATACATGCTACCAATCATTAATGTAATAATAGAGTTCACTGAGAAATATCTTCCATCGGGGATTACTACGAATATTAGT
AATATAAACTTAGTAACATTCTTAATAGAGATTACAGTTGTTTATTTTTGTATAATCTATTATGGGATAATTTATAGAAA
AAAGGATCATTACTATTTATTGAAGGTATTATTGATTTCGAATACTGTTGCTTTTTTTCCTTTTTCGGTCTTATATATCT
TGCCGGAAGTTTTATTTGGGCAATATATTTATTCAGCAATAGTGACTGCGCCGTTCTTAATTATTATCCCATTAGCATTG
GTTTATCAATTCGTTGTAAATAAAATTTATGATATTGACTTTATCTTAGGAAGAATTAGATATTATAGTTTCTTGTCCAT
CATTCCGACAATTGGTATAGTTTGGTTGTCAATTGTATTCGATAGTAAAAGAGCGGATTTTAATGTCATCTTAATTACGT
TATGTACGTTCATAATTTTTCTGTCGGTCTTTTATATTAAAGAATTATTAGACTATAAATTTCGGTTAAAACGATTTTCG
GAAAAATATAATTATCAAGACAGTATTTTTAAATATACGCAATTAATTAAAGGTGTATCAGCTTTAGATCAAGTATTTAA
GAACTTAAAAACAACAATACTAGAAGTTCTACCCGTAAGTAAAGCATACACCTTTGAAGTTGGTTCTGATAGAGAAATTA
TATACTTTGACAAACAGAGTGTTGAACCCAATTGGAAGCTATATAAAACAGAATTTGAAAACGTCACTAAAGAAATAGGG
AAAATTGTTGAGGTTAATCAAGGGTTTTTGATCAAGGTAGGGGAAAAAGGTACAAGTTCTTATGTATTGCTTTGTTTATC
TAGTATCAACACACCGAGGTTGACAAGAGATGAAGTTTCATGGCTGAAAACATTATCGTTTTATACTAGTGTATCCATGG
AAAACGTTGTACAAATTGAAGAACTTATGGATCATTTACAAGCTTTAAAAAGGGAAGATGCTAACCCCGTCTGGCTCAAA
AAACTCATGTACACCATCGAAGAAAAACAACGTTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGAT
ATCATTAAAACGGCAGTGTGAGCTGTTTTTGGCTGAGTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACA
AGCTCGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTT
TTGTATGATTTGGGACTGGTGAAGGCGCTGTCCAAGCTGGTAGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTT
AAATACCGGCAGATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAA
ATGCAGTGAAACATTCTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAG
GATGATGGTGTCGGATTTGATCTGGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGT
CAGGGCTTTAGATGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

63.389

100

0.635