Detailed information NTG0753573

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: QEP20_RS13980
• Genome accession: NZ_CP123977
• Coordinates: 2678249..2679514 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain WH60A
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2673249..2684514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QEP20_RS13960 (QEP20_13960)	yrrB	2674620..2675240 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
QEP20_RS13965 (QEP20_13965)	mnmA	2675326..2676441 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
QEP20_RS13970 (QEP20_13970)	iscSA	2676469..2677611 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
QEP20_RS13975 (QEP20_13975)	cymR	2677630..2678046 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
QEP20_RS13980 (QEP20_13980)	rarA	2678249..2679514 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
QEP20_RS13985 (QEP20_13985)	tcdA	2679554..2680318 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
QEP20_RS13995 (QEP20_13995)	aspS	2680653..2682431 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
QEP20_RS14000 (QEP20_14000)	hisS	2682445..2683719 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
QEP20_RS14005 (QEP20_14005)	yrzK	2684101..2684271 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=753573 QEP20_RS13980 WP_015714437.1 2678249..2679514(+) (rarA) [Bacillus subtilis subsp. subtilis strain WH60A]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=753573 QEP20_RS13980 WP_015714437.1 2678249..2679514(+) (rarA) [Bacillus subtilis subsp. subtilis strain WH60A]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998