Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OKW95_RS03310 Genome accession   NZ_CP110254
Coordinates   679688..680071 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter oleivorans strain S4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 674688..685071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW95_RS03300 (OKW95_03300) - 677590..678699 (-) 1110 WP_107881308.1 efflux RND transporter periplasmic adaptor subunit -
  OKW95_RS03305 (OKW95_03305) - 678768..679403 (-) 636 WP_199945352.1 hypothetical protein -
  OKW95_RS03310 (OKW95_03310) pilG 679688..680071 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  OKW95_RS03315 (OKW95_03315) - 680095..680457 (+) 363 WP_004789266.1 PleD family two-component system response regulator -
  OKW95_RS03320 (OKW95_03320) - 680517..681053 (+) 537 WP_003655289.1 chemotaxis protein CheW -
  OKW95_RS03325 (OKW95_03325) - 681097..683178 (+) 2082 WP_199945353.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=753376 OKW95_RS03310 WP_000389061.1 679688..680071(+) (pilG) [Acinetobacter oleivorans strain S4]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=753376 OKW95_RS03310 WP_000389061.1 679688..680071(+) (pilG) [Acinetobacter oleivorans strain S4]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTAATTGATGACTCAAAAACCATTCGCCGAACAGCCGAAACTTTATT
ACAGCGAGAAGGCTGTGAAGTGATTACTGCGGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAGGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGCGCTTTGATTAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGACGAATTGTTAAACGCAATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37