Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   UKS_RS01355 Genome accession   NZ_AP021887
Coordinates   261152..262162 (+) Length   336 a.a.
NCBI ID   WP_156011452.1    Uniprot ID   A0A6H3S2F6
Organism   Streptococcus sp. 116-D4     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 256152..267162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UKS_RS01330 (UKS_02340) folP 256636..257610 (+) 975 WP_173020430.1 dihydropteroate synthase -
  UKS_RS01335 (UKS_02350) - 257612..258934 (+) 1323 WP_156011449.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  UKS_RS01340 (UKS_02360) folE 258915..259469 (+) 555 WP_000380917.1 GTP cyclohydrolase I FolE -
  UKS_RS01345 (UKS_02370) folK 259627..260439 (+) 813 WP_156011450.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  UKS_RS01350 (UKS_02380) - 260599..260916 (-) 318 WP_156011451.1 DUF960 domain-containing protein -
  UKS_RS01355 (UKS_02390) ccpA 261152..262162 (+) 1011 WP_156011452.1 catabolite control protein A Regulator
  UKS_RS01360 (UKS_02400) - 262216..263178 (-) 963 WP_156011453.1 asparaginase -
  UKS_RS01365 (UKS_02410) - 263244..264635 (+) 1392 WP_156011454.1 Cof-type HAD-IIB family hydrolase -
  UKS_RS01370 (UKS_02420) - 264818..265270 (-) 453 WP_156011455.1 universal stress protein -
  UKS_RS01375 (UKS_02430) - 265432..265734 (+) 303 WP_173020431.1 hypothetical protein -
  UKS_RS01380 (UKS_02440) - 265891..267105 (+) 1215 WP_064276410.1 pyridoxal phosphate-dependent aminotransferase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37224.24 Da        Isoelectric Point: 5.3237

>NTDB_id=75330 UKS_RS01355 WP_156011452.1 261152..262162(+) (ccpA) [Streptococcus sp. 116-D4]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEISVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAMSYLAKENERIAFVSGPLVDDINGKVRLVGYKEALKKAGISYSEGLVFESKYTYEDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADHGVSVPEEFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=75330 UKS_RS01355 WP_156011452.1 261152..262162(+) (ccpA) [Streptococcus sp. 116-D4]
ATGAATACAGACGATACAATAACGATTTATGATGTCGCCCGTGAAGCAGGGGTTTCAATGGCGACGGTTAGCCGTGTAGT
CAATGGCAATAAGAATGTAAAAGAGAATACCCGTAAAAAAGTGCTTGAGGTGATTGATCGTTTGGATTACCGTCCAAATG
CCGTAGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGAGTTGTGATTCCAAATATTACCAATGGTTATTTCTCA
ACGCTTGCTAAAGGGATTGATGATATCGCTGAAATGTACAAGTACAATATTGTCCTTGCTAATAGTGATGAAGATGATGA
CAAGGAAATTTCAGTTGTCAATACACTGTTTTCTAAGCAAGTGGATGGGATCATCTTTATGGGGTACCACTTGACTGAAA
AAATTCGTTCAGAGTTTTCTCGTTCACGGACACCAGTTGTTCTTGCAGGGACAGTGGATGTAGAACATCAGCTTCCAAGT
GTCAATATTGACTACAAACAAGCTACGATTGATGCGATGAGCTACCTTGCTAAAGAAAATGAGCGCATCGCTTTCGTAAG
CGGTCCGCTAGTGGATGATATCAATGGTAAGGTTCGTTTGGTTGGCTACAAGGAAGCCTTGAAAAAAGCAGGGATTTCCT
ATAGCGAAGGATTGGTATTTGAATCTAAATACACTTATGAAGATGGTTATGCCTTGGCTGAACGCTTGATTTCATCAAAC
GCAACTGCAGCAGTTGTAACAGGTGATGAATTGGCAGCAGGTGTCTTGAATGGTTTGGCTGATCACGGTGTGTCTGTGCC
AGAAGAGTTTGAAATCATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACGACTATTGCTCAAC
CTCTTTATGACCTTGGTGCCATTAGTATGCGTATGCTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGCGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTCGTTCAACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6H3S2F6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.643

100

0.946

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.623

99.405

0.881

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment