Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OKW88_RS16885 Genome accession   NZ_CP110105
Coordinates   3297258..3298208 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain CF03     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3292258..3303208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW88_RS16860 (OKW88_16840) rapC 3293718..3294866 (+) 1149 WP_122895033.1 response regulator aspartate phosphatase RapC Regulator
  OKW88_RS16865 (OKW88_16845) phrC 3294850..3294972 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  OKW88_RS16870 (OKW88_16850) yczM 3295072..3295161 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  OKW88_RS16875 (OKW88_16855) yczN 3295243..3295356 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  OKW88_RS16880 (OKW88_16860) thrD 3295509..3296873 (-) 1365 WP_342006778.1 aspartate kinase -
  OKW88_RS16885 (OKW88_16865) ceuB 3297258..3298208 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  OKW88_RS16890 (OKW88_16870) yclO 3298201..3299148 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  OKW88_RS16895 (OKW88_16875) yclP 3299142..3299900 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  OKW88_RS16900 (OKW88_16880) yclQ 3299922..3300875 (+) 954 WP_128422075.1 petrobactin ABC transporter substrate-binding protein YclQ -
  OKW88_RS16905 (OKW88_16885) - 3301115..3302047 (+) 933 WP_342006777.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=752306 OKW88_RS16885 WP_014475804.1 3297258..3298208(+) (ceuB) [Bacillus subtilis strain CF03]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=752306 OKW88_RS16885 WP_014475804.1 3297258..3298208(+) (ceuB) [Bacillus subtilis strain CF03]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525